RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 C4orf33Q8N1A6 199 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 MDGA1Q8NFP4 955 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 EID2BQ96D98 161 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 PSKH2Q96QS6 385 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 C2orf49Q9BVC5 232 aaPredicted RBP11.8□□□□□ -0.52
SKA3-203ENST00000400018 KCNK12Q9HB15 430 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 CD93Q9NPY3 652 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 SEPT3Q9UH03 358 aa11.8□□□□□ -0.52
SKA3-203ENST00000400018 CFAP54Q96N23 3096 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 TICRRQ7Z2Z1 1910 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 A0A087WUV0 522 aaPredicted RBP11.79□□□□□ -0.52
SKA3-203ENST00000400018 DNAJC6O75061 913 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 SPAG7O75391 227 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 VAPBO95292 243 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 TIE1P35590 1138 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 MAGEA3P43357 314 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 EGFLAMQ63HQ2 1017 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 LRRC8BQ6P9F7 803 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 ELMSAN1Q6PJG2 1045 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 RANBP10Q6VN20 620 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 PTAR1Q7Z6K3 402 aaPredicted RBP11.79□□□□□ -0.52
SKA3-203ENST00000400018 MFSD6LQ8IWD5 586 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 DCAF4L2Q8NA75 395 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 LEMD2Q8NC56 503 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 BBOF1Q8ND07 529 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 MGARPQ8TDB4 240 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 IFT43Q96FT9 208 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 EBNA1BP2Q99848 306 aaKnown RBP11.79□□□□□ -0.52
SKA3-203ENST00000400018 MGME1Q9BQP7 344 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 TRMT61BQ9BVS5 477 aaKnown RBP11.79□□□□□ -0.52
SKA3-203ENST00000400018 CAAP1Q9H8G2 361 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 CASS4Q9NQ75 786 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 GDE1Q9NZC3 331 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 CD84Q9UIB8 345 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 NCOR1O75376 2440 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 FGF19O95750 216 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 CR2P20023 1033 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 TPSB2P20231 275 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 HTR7P34969 479 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 CCNHP51946 323 aaPredicted RBP11.79□□□□□ -0.52
SKA3-203ENST00000400018 MAGOHP61326 146 aaKnown RBP11.79□□□□□ -0.52
SKA3-203ENST00000400018 PRPSAP1Q14558 356 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 CRYMQ14894 314 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 SLMAPQ14BN4 828 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 TPSAB1Q15661 275 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 HOOK3Q86VS8 718 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 MRGPRX3Q96LB0 322 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 CAB39LQ9H9S4 337 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 ACSS2Q9NR19 701 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 TBC1D14Q9P2M4 693 aa11.79□□□□□ -0.52
SKA3-203ENST00000400018 TSR3Q9UJK0 312 aaKnown RBP11.79□□□□□ -0.52
SKA3-203ENST00000400018 BDP1A6H8Y1 2624 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 SDR42E2A6NKP2 422 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 E7ESA3 106 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 SERPINF2P08697 491 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 POLR2EP19388 210 aaKnown RBP11.78□□□□□ -0.52
SKA3-203ENST00000400018 MPP1Q00013 466 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 CDK18Q07002 472 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 ZNF460Q14592 562 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 PON2Q15165 354 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 ARSIQ5FYB1 569 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 FAM219BQ5XKK7 198 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 ETFBKMTQ8IXQ9 262 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 DNAJC1Q96KC8 554 aaKnown RBP11.78□□□□□ -0.52
SKA3-203ENST00000400018 IARS2Q9NSE4 1012 aaKnown RBP11.78□□□□□ -0.52
SKA3-203ENST00000400018 DEC1Q9P2X7 70 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 ERVW-1Q9UQF0 538 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 RASGRF2O14827 1237 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 MBTPS2O43462 519 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 C1QAP02745 245 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 HOXB8P17481 243 aaPredicted RBP11.78□□□□□ -0.52
SKA3-203ENST00000400018 GALK1P51570 392 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 LRRC14Q15048 493 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 ARMC12Q5T9G4 340 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 MROH9Q5TGP6 573 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 C22orf39Q6P5X5 142 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 PKN3Q6P5Z2 889 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 SRRM1Q8IYB3 904 aaKnown RBP11.78□□□□□ -0.52
SKA3-203ENST00000400018 SPATA6LQ8N4H0 392 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 MREGQ8N565 214 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 TBATAQ96M53 351 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 RIPOR3Q96MK2 946 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 C2orf42Q9NWW7 574 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 ZNF510Q9Y2H8 683 aa11.78□□□□□ -0.52
SKA3-203ENST00000400018 PRR23AA6NEV1 266 aa11.77□□□□□ -0.52
SKA3-203ENST00000400018 CACNG3O60359 315 aa11.77□□□□□ -0.52
SKA3-203ENST00000400018 LEFTY1O75610 366 aa11.77□□□□□ -0.52
SKA3-203ENST00000400018 PRKCHP24723 683 aa11.77□□□□□ -0.52
SKA3-203ENST00000400018 ARNTP27540 789 aa11.77□□□□□ -0.52
SKA3-203ENST00000400018 IL12RB1P42701 662 aa11.77□□□□□ -0.52
SKA3-203ENST00000400018 CAV1Q03135 178 aa11.77□□□□□ -0.52
SKA3-203ENST00000400018 CDH17Q12864 832 aa11.77□□□□□ -0.52
SKA3-203ENST00000400018 FNDC3BQ53EP0 1204 aaKnown RBP11.77□□□□□ -0.52
SKA3-203ENST00000400018 OR2A12Q8NGT7 310 aa11.77□□□□□ -0.52
SKA3-203ENST00000400018 PAFAH2Q99487 392 aa11.77□□□□□ -0.52
SKA3-203ENST00000400018 TDRD1Q9BXT4 1180 aaKnown RBP11.77□□□□□ -0.52
SKA3-203ENST00000400018 LRRC40Q9H9A6 602 aa11.77□□□□□ -0.52
SKA3-203ENST00000400018 C20orf96Q9NUD7 363 aaPredicted RBP11.77□□□□□ -0.52
SKA3-203ENST00000400018 ELOVL2Q9NXB9 296 aa11.77□□□□□ -0.52
SKA3-203ENST00000400018 SAMD15Q9P1V8 674 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms