RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 RECQL5O94762 991 aaPredicted RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 DHFRP00374 187 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 USP17L7P0C7H9 530 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 ACTR3P61158 418 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 ZBTB6Q15916 424 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 PUS10Q3MIT2 529 aaKnown RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 SLC47A2Q86VL8 602 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 GIPC3Q8TF64 312 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 ZSWIM1Q9BR11 485 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 ZNF471Q9BX82 626 aaPredicted RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 CDH7Q9ULB5 785 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 MED31Q9Y3C7 131 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 DGKAP23743 735 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 CNTFP26441 200 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 CRABP2P29373 138 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 HSD17B2P37059 387 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 XIAPP98170 497 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 NRG1Q02297 640 aaPredicted RBP12.4□□□□□ -0.42
SMU1-201ENST00000397149 FRG1Q14331 258 aaKnown RBP12.4□□□□□ -0.42
SMU1-201ENST00000397149 UBR7Q8N806 425 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 MINDY2Q8NBR6 621 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TCP10LQ8TDR4 215 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 CUEDC1Q9NWM3 386 aaPredicted RBP12.4□□□□□ -0.42
SMU1-201ENST00000397149 RRN3Q9NYV6 651 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TMEM216Q9P0N5 145 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 LOC100509620A0A075B734 347 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 BTBD19C9JJ37 291 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 PPM1BO75688 479 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 FAM153BP0C7A2 387 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 RGS19P49795 217 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 PCNX4Q63HM2 1172 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 ZNF730Q6ZMV8 503 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 KLHL5Q96PQ7 755 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 NOX1Q9Y5S8 564 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 PIK3C2GO75747 1445 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 AHCYP23526 432 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 SERPINA4P29622 427 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 MANFP55145 182 aaKnown RBP12.4□□□□□ -0.42
SMU1-201ENST00000397149 SLC34A1Q06495 639 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 ALG10Q5BKT4 473 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 CDKL4Q5MAI5 379 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 MSL3Q8N5Y2 521 aaKnown RBP12.4□□□□□ -0.42
SMU1-201ENST00000397149 METTL21AQ8WXB1 218 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 ANKS1AQ92625 1134 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 GAL3ST4Q96RP7 486 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 NDNQ99608 321 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 HEPHQ9BQS7 1158 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 SETD4Q9NVD3 440 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 RGS17Q9UGC6 210 aaPredicted RBP12.4□□□□□ -0.42
SMU1-201ENST00000397149 CCDC85CA6NKD9 419 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 SSX5O60225 188 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 YBX3P16989 372 aaKnown RBP eCLIP12.4□□□□□ -0.42
SMU1-201ENST00000397149 ELK3P41970 407 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 RGS8P57771 180 aaPredicted RBP12.4□□□□□ -0.42
SMU1-201ENST00000397149 FSTL1Q12841 308 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 CDH17Q12864 832 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 NAE1Q13564 534 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TMEM176AQ96HP8 235 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 BTBD10Q9BSF8 475 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 EXD2Q9NVH0 621 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 ZNF639Q9UID6 485 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TBC1D3DA0A087WVF3 549 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TBC1D3IA0A087WXS9 549 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TBC1D3EA0A087X179 549 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TBC1D3KA0A087X1G2 549 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TBC1D3FA6NER0 549 aaPredicted RBP12.4□□□□□ -0.42
SMU1-201ENST00000397149 TBC1D3LB9A6J9 549 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 C9IYK1 514 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 FCER2P06734 321 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TBC1D3HP0C7X1 549 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 IL1R1P14778 569 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 CTPS1P17812 591 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 NT5EP21589 574 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 HTR1BP28222 390 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 GJA9P57773 515 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 CRADDP78560 199 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TBC1D3GQ6DHY5 549 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TBC1D3CQ6IPX1 549 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 FAM129CQ86XR2 697 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 SCUBE3Q8IX30 993 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 GPR65Q8IYL9 337 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TBC1D3Q8IZP1 549 aaPredicted RBP12.4□□□□□ -0.42
SMU1-201ENST00000397149 CPT1CQ8TCG5 803 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 NELL1Q92832 810 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 SNTG1Q9NSN8 517 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 ZNRF3Q9ULT6 936 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 TELO2Q9Y4R8 837 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 ARAP3Q8WWN8 1544 aa12.4□□□□□ -0.42
SMU1-201ENST00000397149 RYKP34925 604 aa12.4□□□□□ -0.43
SMU1-201ENST00000397149 PPIL2Q13356 520 aa12.4□□□□□ -0.43
SMU1-201ENST00000397149 MAPKAPK3Q16644 382 aa12.4□□□□□ -0.43
SMU1-201ENST00000397149 CCNYL2Q5T2Q4 361 aa12.4□□□□□ -0.43
SMU1-201ENST00000397149 BROXQ5VW32 411 aa12.4□□□□□ -0.43
SMU1-201ENST00000397149 CIR1Q86X95 450 aaPredicted RBP12.4□□□□□ -0.43
SMU1-201ENST00000397149 OR8H3Q8N146 312 aa12.4□□□□□ -0.43
SMU1-201ENST00000397149 SPATA6LQ8N4H0 392 aa12.4□□□□□ -0.43
SMU1-201ENST00000397149 DNAAF1Q8NEP3 725 aa12.4□□□□□ -0.43
SMU1-201ENST00000397149 OXNAD1Q96HP4 312 aaPredicted RBP12.4□□□□□ -0.43
SMU1-201ENST00000397149 PABPC3Q9H361 631 aaKnown RBP12.4□□□□□ -0.43
SMU1-201ENST00000397149 EURLQ9NYK6 297 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms