RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 NYAP1Q6ZVC0 841 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 ZSCAN30Q86W11 494 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 PARGQ86W56 976 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 RBFAQ8N0V3 343 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 TP53I13Q8NBR0 393 aaPredicted RBP18.48■□□□□ 0.55
FXN-203ENST00000396366 DENND6BQ8NEG7 585 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 HSPH1Q92598 858 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 TRIM11Q96F44 468 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 APOLD1Q96LR9 279 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 EIF3CQ99613 913 aaKnown RBP18.48■□□□□ 0.55
FXN-203ENST00000396366 PCDH12Q9NPG4 1184 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 DONSONQ9NYP3 566 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 NLGN3Q9NZ94 848 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 IFNKQ9P0W0 207 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 CAPN11Q9UMQ6 739 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 U3KQA8 63 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 ANKRD36A6QL64 1941 aa18.48■□□□□ 0.55
FXN-203ENST00000396366 ADAMTS20P59510 1910 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 FAM208BQ5VWN6 2430 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 TSPAN11A1L157 253 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 SERPING1P05155 500 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 CDK4P11802 303 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 JUNDP17535 347 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 XPAP23025 273 aaPredicted RBP18.47■□□□□ 0.55
FXN-203ENST00000396366 PCK1P35558 622 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 HNF1BP35680 557 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 ZBED6P86452 979 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 ILKQ13418 452 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 PSTKQ8IV42 348 aaKnown RBP18.47■□□□□ 0.55
FXN-203ENST00000396366 LMX1AQ8TE12 382 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 SYN2Q92777 582 aaPredicted RBP18.47■□□□□ 0.55
FXN-203ENST00000396366 SP110Q9HB58 689 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 GPSM3Q9Y4H4 160 aa18.47■□□□□ 0.55
FXN-203ENST00000396366 NEMP2A6NFY4 417 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 GOLGA6L19H0YKK7 550 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 RIOK3O14730 519 aaKnown RBP18.46■□□□□ 0.55
FXN-203ENST00000396366 GCATO75600 419 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 GYPCP04921 128 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 RARAP10276 462 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 CKMT1AP12532 417 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 LIG3P49916 1009 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 IL10RBQ08334 325 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 SLC10A7Q0GE19 358 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 C1orf61Q13536 156 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 IRF4Q15306 451 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 NFKBIBQ15653 356 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 DPYSL2Q16555 572 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 ZSCAN23Q3MJ62 389 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 HS1BP3Q53T59 392 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 POLNQ7Z5Q5 900 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 CPNE8Q86YQ8 564 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 HCAR2Q8TDS4 363 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 HNRNPLLQ8WVV9 542 aaKnown RBP18.46■□□□□ 0.55
FXN-203ENST00000396366 ZNF641Q96N77 438 aaPredicted RBP18.46■□□□□ 0.55
FXN-203ENST00000396366 NUP85Q9BW27 656 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 CINPQ9BW66 212 aaPredicted RBP18.46■□□□□ 0.55
FXN-203ENST00000396366 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.46■□□□□ 0.55
FXN-203ENST00000396366 DKK4Q9UBT3 224 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 LHX6Q9UPM6 363 aa18.46■□□□□ 0.55
FXN-203ENST00000396366 BZW2Q9Y6E2 419 aaKnown RBP18.46■□□□□ 0.55
FXN-203ENST00000396366 AQP9O43315 295 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 ALPPL2P10696 532 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 C6P13671 934 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 CASP14P31944 242 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 EIF4A3P38919 411 aaKnown RBP18.45■□□□□ 0.54
FXN-203ENST00000396366 CSNK1DP48730 415 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 SCNN1BP51168 640 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 THOP1P52888 689 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 ELP6Q0PNE2 266 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 WSCD2Q2TBF2 565 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 DEFB133Q30KQ1 61 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 BOLA3Q53S33 107 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 CSPG4P5Q96PW8 444 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 TUBGCP5Q96RT8 1024 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 CLCA2Q9UQC9 943 aa18.45■□□□□ 0.54
FXN-203ENST00000396366 LUC7L2Q9Y383 392 aaKnown RBP18.45■□□□□ 0.54
FXN-203ENST00000396366 URB1O60287 2271 aaKnown RBP18.45■□□□□ 0.54
FXN-203ENST00000396366 A8MX80 341 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 H3BM21 787 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 H3BRJ5 948 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 PEX11BO96011 259 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 CYP1A2P05177 515 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 MMP12P39900 470 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 SUOXP51687 545 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 ADKP55263 362 aaKnown RBP18.44■□□□□ 0.54
FXN-203ENST00000396366 YPEL5P62699 121 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 E2F1Q01094 437 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 PIGHQ14442 188 aaPredicted RBP18.44■□□□□ 0.54
FXN-203ENST00000396366 GRM3Q14832 879 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 ACAP1Q15027 740 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 LRRC14Q15048 493 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 PRRT3Q5FWE3 981 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 CCDC122Q5T0U0 273 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 CFAP58Q5T655 872 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 FAM181AQ8N9Y4 354 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 RFFLQ8WZ73 363 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 ATP13A3Q9H7F0 1226 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 PCDH18Q9HCL0 1135 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 ANAPC7Q9UJX3 599 aa18.44■□□□□ 0.54
FXN-203ENST00000396366 ATP8A1Q9Y2Q0 1164 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms