RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SYN2Q92777 582 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 COL26A1Q96A83 441 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 RAB7BQ96AH8 199 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 BBC3Q96PG8 261 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 WRAP53Q9BUR4 548 aaKnown RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 PACSIN1Q9BY11 444 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 SUV39H2Q9H5I1 410 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 CATSPERBQ9H7T0 1116 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 PCDH12Q9NPG4 1184 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 UBA2Q9UBT2 640 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-205ENST00000394892 HPCAL4Q9UM19 191 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 AK5Q9Y6K8 562 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 CHD5Q8TDI0 1954 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 DOCK9Q9BZ29 2069 aa8.95□□□□□ -0.98
ATG4A-205ENST00000394892 ANKRD62A6NC57 917 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 CAPN8A6NHC0 703 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 K7ESM1 405 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 RIOK3O14730 519 aaKnown RBP8.94□□□□□ -0.98
ATG4A-205ENST00000394892 FFAR2O15552 330 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 PRPSAP2O60256 369 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 RFPL3O75679 317 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 IGSF6O95976 241 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 CSF2P04141 144 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 NME1P15531 152 aaKnown RBP8.94□□□□□ -0.98
ATG4A-205ENST00000394892 CKMT2P17540 419 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 CR2P20023 1033 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 ACP1P24666 158 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 HNRNPH3P31942 346 aaKnown RBP8.94□□□□□ -0.98
ATG4A-205ENST00000394892 CASP14P31944 242 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 CSNK1DP48730 415 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 ZBED6P86452 979 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 INSM1Q01101 510 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-205ENST00000394892 SLC10A7Q0GE19 358 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 CCDC15Q0P6D6 951 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 RALGDSQ12967 914 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 TARDBPQ13148 414 aaKnown RBP eCLIP8.94□□□□□ -0.98
ATG4A-205ENST00000394892 MMRN1Q13201 1228 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 IRF4Q15306 451 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 UGP2Q16851 508 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 HES3Q5TGS1 186 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 SRLQ86TD4 932 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 VPS36Q86VN1 386 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 ZNF354CQ86Y25 554 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 PSTKQ8IV42 348 aaKnown RBP8.94□□□□□ -0.98
ATG4A-205ENST00000394892 OXR1Q8N573 874 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 NIPA2Q8N8Q9 360 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 PLA2G15Q8NCC3 412 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 LSM14AQ8ND56 463 aaKnown RBP8.94□□□□□ -0.98
ATG4A-205ENST00000394892 ZNF548Q8NEK5 533 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-205ENST00000394892 FAM71BQ8TC56 605 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 RFFLQ8WZ73 363 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 SLC39A7Q92504 469 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 ECHDC3Q96DC8 303 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 CSPG4P5Q96PW8 444 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 SMIM14Q96QK8 99 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 OSBPL1AQ9BXW6 950 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 XPO4Q9C0E2 1151 aaKnown RBP8.94□□□□□ -0.98
ATG4A-205ENST00000394892 CLPBQ9H078 707 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 ZWILCHQ9H900 591 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 PCDH18Q9HCL0 1135 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 DNAJC28Q9NX36 388 aa8.94□□□□□ -0.98
ATG4A-205ENST00000394892 IPO11Q9UI26 975 aaKnown RBP8.94□□□□□ -0.98
ATG4A-205ENST00000394892 SMG1Q96Q15 3661 aaKnown RBP8.93□□□□□ -0.98
ATG4A-205ENST00000394892 A0A0U1RQS6 177 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 A0A1W2PNU3 283 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-205ENST00000394892 ARHGAP42A6NI28 874 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 EIF3CLB5ME19 914 aaKnown RBP8.93□□□□□ -0.98
ATG4A-205ENST00000394892 DFFAO00273 331 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 SCAMP1O15126 338 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 MAFKO60675 156 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 MAGEC1O60732 1142 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 SERPING1P05155 500 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 MYBL1P10243 752 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 C6P13671 934 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 EIF4A3P38919 411 aaKnown RBP8.93□□□□□ -0.98
ATG4A-205ENST00000394892 MMP12P39900 470 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 RABIFP47224 123 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 TAS2R40P59535 323 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 SGCGQ13326 291 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 C1orf61Q13536 156 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 PDE1CQ14123 709 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-205ENST00000394892 TDRD12Q587J7 1177 aaKnown RBP8.93□□□□□ -0.98
ATG4A-205ENST00000394892 PPP1R2P3Q6NXS1 205 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 ALKBH5Q6P6C2 394 aaKnown RBP8.93□□□□□ -0.98
ATG4A-205ENST00000394892 ZNF605Q86T29 641 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 CBARPQ8N350 705 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-205ENST00000394892 DENND6BQ8NEG7 585 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 HCAR2Q8TDS4 363 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 LRRN4Q8WUT4 740 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 HSPH1Q92598 858 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 IFT43Q96FT9 208 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 CRELD1Q96HD1 420 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 APOLD1Q96LR9 279 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 EIF3CQ99613 913 aaKnown RBP8.93□□□□□ -0.98
ATG4A-205ENST00000394892 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.93□□□□□ -0.98
ATG4A-205ENST00000394892 NUP85Q9BW27 656 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.93□□□□□ -0.98
ATG4A-205ENST00000394892 SCINQ9Y6U3 715 aa8.93□□□□□ -0.98
ATG4A-205ENST00000394892 COL5A1P20908 1838 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-205ENST00000394892 NEMP1O14524 444 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms