RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 SPRED1Q7Z699 444 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 BPHLQ86WA6 291 aaPredicted RBP19.01■□□□□ 0.63
HOXC6-202ENST00000394331 NT5DC4Q86YG4 428 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 PPWD1Q96BP3 646 aaKnown RBP19.01■□□□□ 0.63
HOXC6-202ENST00000394331 RNF157Q96PX1 679 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 UPF3AQ9H1J1 476 aaKnown RBP19.01■□□□□ 0.63
HOXC6-202ENST00000394331 CDYLQ9Y232 598 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 ST14Q9Y5Y6 855 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 PTPRFP10586 1907 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 GOLGA8CPA6NN73 597 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 CAPGP40121 348 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 RPL14P50914 215 aaKnown RBP19.01■□□□□ 0.63
HOXC6-202ENST00000394331 PRKAA2P54646 552 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 NEDD8Q15843 81 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 MAP1SQ66K74 1059 aaPredicted RBP19.01■□□□□ 0.63
HOXC6-202ENST00000394331 SIGIRRQ6IA17 410 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 DLK2Q6UY11 383 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 NAPRTQ6XQN6 538 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 ILDR2Q71H61 639 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 EPHX4Q8IUS5 362 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 BTN2A3PQ96KV6 586 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 NT5C1AQ9BXI3 368 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 WDR55Q9H6Y2 383 aaPredicted RBP19.01■□□□□ 0.63
HOXC6-202ENST00000394331 BCLAF3A2AJT9 711 aaKnown RBP19■□□□□ 0.63
HOXC6-202ENST00000394331 ASB14A6NK59 587 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 G3V2L1 256 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 TRIM13O60858 407 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 RASAL1O95294 804 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 APRTP07741 180 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 ENO2P09104 434 aaPredicted RBP19■□□□□ 0.63
HOXC6-202ENST00000394331 CBX2Q14781 532 aaPredicted RBP19■□□□□ 0.63
HOXC6-202ENST00000394331 C6orf10Q5SRN2 563 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 PERM1Q5SV97 790 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 NPNTQ6UXI9 565 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 BTLAQ7Z6A9 289 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 SNX19Q92543 992 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 SLC45A3Q96JT2 553 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 FAR2Q96K12 515 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 PCDHAC1Q9H158 963 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 CCM2LQ9NUG4 571 aaPredicted RBP19■□□□□ 0.63
HOXC6-202ENST00000394331 ADAM28Q9UKQ2 775 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 TSPAN16Q9UKR8 245 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 PSMD11O00231 422 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 CAPN15O75808 1086 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 AMHP03971 560 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 MZF1P28698 734 aaPredicted RBP19■□□□□ 0.63
HOXC6-202ENST00000394331 BMPR1AP36894 532 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 TRIM32Q13049 653 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 LAMC2Q13753 1193 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 TRIM71Q2Q1W2 868 aaKnown RBP19■□□□□ 0.63
HOXC6-202ENST00000394331 IQSEC1Q6DN90 963 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 FAM183BPQ6ZVS7 135 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 CYP4V2Q6ZWL3 525 aaPredicted RBP19■□□□□ 0.63
HOXC6-202ENST00000394331 OR2T34Q8NGX1 318 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 OR2T3Q8NH03 318 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 NPAS2Q99743 824 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 SPAG4Q9NPE6 437 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 MID2Q9UJV3 735 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 AKT3Q9Y243 479 aa19■□□□□ 0.63
HOXC6-202ENST00000394331 E7ENX8 843 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 ACOX3O15254 700 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 ARF4P18085 180 aaPredicted RBP18.99■□□□□ 0.63
HOXC6-202ENST00000394331 IFITM3Q01628 133 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 STX5Q13190 355 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 MAPRE2Q15555 327 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 SAMD4BQ5PRF9 694 aaKnown RBP18.99■□□□□ 0.63
HOXC6-202ENST00000394331 LACC1Q8IV20 430 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 TMEM130Q8N3G9 435 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 ZUFSPQ96AP4 578 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 NACC2Q96BF6 587 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 CPB2Q96IY4 423 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 BCL7BQ9BQE9 202 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 SEZ6LQ9BYH1 1024 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 ATP13A3Q9H7F0 1226 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 PDGFCQ9NRA1 345 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 FBXO8Q9NRD0 319 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 AGPAT4Q9NRZ5 378 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 DPP3Q9NY33 737 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 PCDHGA11Q9Y5H2 935 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 ANK1P16157 1881 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 TIPRLO75663 272 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 TGM2P21980 687 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 SNX17Q15036 470 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 SH3PXD2AQ5TCZ1 1133 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 UGT3A1Q6NUS8 523 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 KIAA0408Q6ZU52 694 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 LINC01465Q8N7H1 131 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 USP33Q8TEY7 942 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 CAPSLQ8WWF8 208 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 CSF3RQ99062 836 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 BEGAINQ9BUH8 593 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 MUC3BQ9H195 1237 aa18.99■□□□□ 0.63
HOXC6-202ENST00000394331 TP63Q9H3D4 680 aaPredicted RBP18.99■□□□□ 0.63
HOXC6-202ENST00000394331 GBA2Q9HCG7 927 aaPredicted RBP18.99■□□□□ 0.63
HOXC6-202ENST00000394331 COPG1Q9Y678 874 aaKnown RBP18.99■□□□□ 0.63
HOXC6-202ENST00000394331 DPYSL4O14531 572 aa18.98■□□□□ 0.63
HOXC6-202ENST00000394331 GRID2O43424 1007 aa18.98■□□□□ 0.63
HOXC6-202ENST00000394331 DEAF1O75398 565 aaPredicted RBP18.98■□□□□ 0.63
HOXC6-202ENST00000394331 DNAJB5O75953 348 aa18.98■□□□□ 0.63
HOXC6-202ENST00000394331 GARSP41250 739 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms