RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 HTR3EA5X5Y0 456 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 FAM155AB1AL88 458 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 AP3B1O00203 1094 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ZNF862O60290 1169 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ALDH2P05091 517 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 BPGMP07738 259 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 RAP2AP10114 183 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 PPM1AP35813 382 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 RBM34P42696 430 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 CCR3P51677 355 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 EPHB3P54753 998 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 MRPS5P82675 430 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 HSDL1Q3SXM5 330 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ZNF805Q5CZA5 627 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SEL1L3Q68CR1 1132 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SCARA3Q6AZY7 606 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 JADE1Q6IE81 842 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 PRMT9Q6P2P2 845 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 FAM111BQ6SJ93 734 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 AMIGO2Q86SJ2 522 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 FAM156AQ8NDB6 213 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ZNF555Q8NEP9 628 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 CA5BP1Q8WTZ4 195 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SHC3Q92529 594 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ITCHQ96J02 903 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 APOL2Q9BQE5 337 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 LXNQ9BS40 222 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 TMEM121Q9BTD3 319 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 RNF32Q9H0A6 362 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SAP130Q9H0E3 1048 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 HIPK3Q9H422 1215 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 MAGEE1Q9HCI5 957 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SNTG1Q9NSN8 517 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 PCDHGA6Q9Y5G7 932 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SF3B1O75533 1304 aaKnown RBP eCLIP5.76□□□□□ -1.495e-13■■■■■ 102
RFC1-202ENST00000381897 RGSL1A5PLK6 1076 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 KBTBD13C9JR72 458 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ITM2AO43736 263 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 LILRB3O75022 631 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ULK1O75385 1050 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 MTRF1O75570 445 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 TOMM70O94826 608 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 PCCBP05166 539 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 CKMP06732 381 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 HNRNPA1P09651 372 aaKnown RBP eCLIP5.76□□□□□ -1.49
RFC1-202ENST00000381897 SYN1P17600 705 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 FSHRP23945 695 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 CRHR1P34998 444 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SPRP35270 261 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 ARRB1P49407 418 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 JAK3P52333 1124 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ABRQ12979 859 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 CRY1Q16526 586 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ARL13BQ3SXY8 428 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 RNASEH2BQ5TBB1 312 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 ABRAXAS1Q6UWZ7 409 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 TAS2R42Q7RTR8 314 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 C16orf62Q7Z3J2 963 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SNX31Q8N9S9 440 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 RNASE11Q8TAA1 199 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 METTL6Q8TCB7 284 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 BRIX1Q8TDN6 353 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 HAS1Q92839 578 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 TANKQ92844 425 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 USP13Q92995 863 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 CD101Q93033 1021 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 FBXO32Q969P5 355 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 MCEEQ96PE7 176 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 WRNIP1Q96S55 665 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 NAT9Q9BTE0 207 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 RAD21L1Q9H4I0 556 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 EHD1Q9H4M9 534 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 RAB9BQ9NP90 201 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 TMEM9Q9P0T7 183 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 CNOT11Q9UKZ1 510 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 PCDHGB5Q9Y5G0 923 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 TNPO3Q9Y5L0 923 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 LAMB4A4D0S4 1761 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 BAZ2BQ9UIF8 2168 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 FOXO6A8MYZ6 492 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 NFIBO00712 420 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 FBP2O00757 339 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SCDO00767 359 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 TOR1BO14657 336 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 SNAP91O60641 907 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 XYLBO75191 536 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ZBTB11O95625 1053 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 CALCAP01258 141 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 ALBP02768 609 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 CSTBP04080 98 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 DLDP09622 509 aaKnown RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 SERPINB5P36952 375 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 PEX3P56589 373 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 TRAF2Q12933 501 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 MOGQ16653 247 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 CERKLQ49MI3 558 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 OGFRL1Q5TC84 451 aaPredicted RBP5.76□□□□□ -1.49
RFC1-202ENST00000381897 MROH9Q5TGP6 573 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 TMC5Q6UXY8 1006 aa5.76□□□□□ -1.49
RFC1-202ENST00000381897 PLEKHM3Q6ZWE6 761 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms