RNA–Protein interactions for RNA: ENST00000377200.9

PTAR1-202, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene PTAR1, Length 9,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-202ENST00000377200 NFIAQ12857 509 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 SKIV2LQ15477 1246 aaKnown RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 SSX2Q16385 188 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 VWA5B1Q5TIE3 1220 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 C9orf131Q5VYM1 1079 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 RNF135Q8IUD6 432 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 DEPDC4Q8N2C3 294 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 GPD1LQ8N335 351 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 OR8K3Q8NH51 312 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 TRPM4Q8TD43 1214 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 SLC7A6OSQ96CW6 309 aaPredicted RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 HEXIM2Q96MH2 286 aaKnown RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 ERMAPQ96PL5 475 aaPredicted RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 SYT17Q9BSW7 474 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 XKR8Q9H6D3 395 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 TBC1D13Q9NVG8 400 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 NCKIPSDQ9NZQ3 722 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 EIF3KQ9UBQ5 218 aaKnown RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 RAP2CQ9Y3L5 183 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 RAD54BQ9Y620 910 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 CPQQ9Y646 472 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 CNTNAP5Q8WYK1 1306 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 FOXO6A8MYZ6 492 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 TK2O00142 265 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 PRMT3O60678 531 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 SUPT7LO94864 414 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 RPLP0P05388 317 aaKnown RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 ANXA6P08133 673 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 RPS3P23396 243 aaKnown RBP eCLIP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 CDK18Q07002 472 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 SURF1Q15526 300 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 TATDN1Q6P1N9 297 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 USP17L2Q6R6M4 530 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 FAM20CQ8IXL6 584 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 C12orf50Q8NA57 414 aaPredicted RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 FAM149B1Q96BN6 582 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 CCDC120Q96HB5 630 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 COPS4Q9BT78 406 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 MED10Q9BTT4 135 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 UNC93B1Q9H1C4 597 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 DEFB129Q9H1M3 183 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 SYTL2Q9HCH5 934 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 NDUFAF4Q9P032 175 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 H2AFY2Q9P0M6 372 aaPredicted RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 CNOT11Q9UKZ1 510 aaKnown RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 SLC9A8Q9Y2E8 581 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 BBIP1A8MTZ0 92 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 ANKRD63C9JTQ0 380 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 TRDMT1O14717 391 aaKnown RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 ALX3O95076 343 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 SNAP29O95721 258 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 PDGFRAP16234 1089 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 ZNF182P17025 639 aaPredicted RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 UQCRC1P31930 480 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 RAB5BP61020 215 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 OSTNP61366 133 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 GRIK5Q16478 980 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 CLEC16AQ2KHT3 1053 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 MPP7Q5T2T1 576 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 FAM92BQ6ZTR7 304 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 UXS1Q8NBZ7 420 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 NODALQ96S42 347 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 TMEM161AQ9NX61 479 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.08□□□□□ -1.761e-7■■■□□ 14.6
PTAR1-202ENST00000377200 ANKRD6Q9Y2G4 727 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 ACOT9Q9Y305 439 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 PCDHA1Q9Y5I3 950 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 CCDC154A6NI56 674 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 SGCEO43556 437 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 TCEA3O75764 348 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 CREB1P16220 341 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 ZNF3P17036 446 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 MUTP22033 750 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 AZGP1P25311 298 aaKnown RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 PRELPP51888 382 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 PEX6Q13608 980 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 BTG3Q14201 252 aaPredicted RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 RBM48Q5RL73 367 aaKnown RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 TYW3Q6IPR3 259 aaKnown RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 PADI6Q6TGC4 694 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 ATPAF2Q8N5M1 289 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 MCEEQ96PE7 176 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 BIN3Q9NQY0 253 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 MAT2BQ9NZL9 334 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 MED11Q9P086 117 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 MORF4L1Q9UBU8 362 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 DRG1Q9Y295 367 aaKnown RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 ADGRA2Q96PE1 1338 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 KCNK1O00180 336 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 GDF11O95390 407 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 ZNF682O95780 498 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 SNRPB2P08579 225 aaKnown RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 STAT3P40763 770 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 USF2Q15853 346 aaPredicted RBP4.08□□□□□ -1.76
PTAR1-202ENST00000377200 PLEKHG6Q3KR16 790 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 DCAF6Q58WW2 860 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 FGD2Q7Z6J4 655 aa4.08□□□□□ -1.76
PTAR1-202ENST00000377200 MCOLN3Q8TDD5 553 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms