RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 FETUBQ9UGM5 382 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 RAP2CQ9Y3L5 183 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 KCTD3Q9Y597 815 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 HS3ST4Q9Y661 456 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 DOCK5Q9H7D0 1870 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 TMEM233B4DJY2 109 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 TBL1XO60907 577 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 ACVRL1P37023 503 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 RGS4P49798 205 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 SLC20A2Q08357 652 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 ARHGEF7Q14155 803 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 MFN1Q8IWA4 741 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 TTC9BQ8N6N2 239 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 NAT14Q8WUY8 206 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 AUTS2Q8WXX7 1259 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 CNDP1Q96KN2 507 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 CAPNS2Q96L46 248 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 WDR41Q9HAD4 459 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 SYTL2Q9HCH5 934 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 ANKRD6Q9Y2G4 727 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 TCAF1Q9Y4C2 921 aa13.66□□□□□ -0.22
CLIC4-201ENST00000374379 MBLAC1A4D2B0 266 aaPredicted RBP13.65□□□□□ -0.22
CLIC4-201ENST00000374379 AHSGP02765 367 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 INHAP05111 366 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 NFKBIAP25963 317 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 NEK3P51956 506 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 CCDC15Q0P6D6 951 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 KLF10Q13118 480 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 PLEKHG4Q58EX7 1191 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 FBXL22Q6P050 247 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 SAPCD2Q86UD0 394 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 GDPD5Q8WTR4 605 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 CENPKQ9BS16 269 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 CASS4Q9NQ75 786 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 MTMR10Q9NXD2 777 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 TMEM88BA6NKF7 163 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 MRASO14807 208 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 ACSBG2Q5FVE4 666 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 HEXDCQ8WVB3 486 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 TSPAN18Q96SJ8 248 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 HIPK3Q9H422 1215 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 BATF3Q9NR55 127 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 SLCO1B7G3V0H7 640 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 CCNT2O60583 730 aaKnown RBP13.65□□□□□ -0.22
CLIC4-201ENST00000374379 HIST1H2AGP0C0S8 130 aaPredicted RBP13.65□□□□□ -0.22
CLIC4-201ENST00000374379 HIST1H2ADP20671 130 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 PIK3R1P27986 724 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 MAP7Q14244 749 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 PAFAH1B3Q15102 231 aaKnown RBP13.65□□□□□ -0.22
CLIC4-201ENST00000374379 NR6A1Q15406 480 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 TEDDM1Q5T9Z0 273 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 CGB2Q6NT52 195 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 ANKS3Q6ZW76 656 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 TTC30BQ8N4P2 665 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 OR13C4Q8NGS5 318 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 IRGQQ8WZA9 623 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 PBXIP1Q96AQ6 731 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 HIST1H2AHQ96KK5 128 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 HIST1H2AJQ99878 128 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 H2AFJQ9BTM1 129 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 TRIM54Q9BYV2 358 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 APPL1Q9UKG1 709 aa13.65□□□□□ -0.22
CLIC4-201ENST00000374379 CD3EAPO15446 510 aaKnown RBP13.64□□□□□ -0.23
CLIC4-201ENST00000374379 IL10P22301 178 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 SCNN1AP37088 669 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 IDH3AP50213 366 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 MRPS35P82673 323 aaKnown RBP13.64□□□□□ -0.23
CLIC4-201ENST00000374379 PLOD1Q02809 727 aaPredicted RBP13.64□□□□□ -0.23
CLIC4-201ENST00000374379 ZBTB6Q15916 424 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 SLC9B1Q4ZJI4 515 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 ALFQ53S48 1182 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 HECTD2Q5U5R9 776 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 CST9Q5W186 159 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 GK5Q6ZS86 529 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 SZRD1Q7Z422 152 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 SERINC5Q86VE9 423 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 NMRK1Q9NWW6 199 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 ARL5AQ9Y689 179 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 KIAA1217Q5T5P2 1943 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 PSMD12O00232 456 aaPredicted RBP13.64□□□□□ -0.23
CLIC4-201ENST00000374379 PEX1O43933 1283 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 TGDSO95455 350 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 SELPP16109 830 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 TACR2P21452 398 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 CORO1AP31146 461 aaKnown RBP13.64□□□□□ -0.23
CLIC4-201ENST00000374379 MOGSQ13724 837 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 NFYCQ13952 458 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 RBM20Q5T481 1227 aaKnown RBP13.64□□□□□ -0.23
CLIC4-201ENST00000374379 LPCAT4Q643R3 524 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 ANKS6Q68DC2 871 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 MIER2Q8N344 545 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 ZMIZ2Q8NF64 920 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 BHLHE22Q8NFJ8 381 aaPredicted RBP13.64□□□□□ -0.23
CLIC4-201ENST00000374379 MIPOL1Q8TD10 442 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 WDR60Q8WVS4 1066 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 SPATS2LQ9NUQ6 558 aaKnown RBP13.64□□□□□ -0.23
CLIC4-201ENST00000374379 RBM47A0AV96 593 aaKnown RBP13.64□□□□□ -0.23
CLIC4-201ENST00000374379 MGEA5O60502 916 aa13.64□□□□□ -0.23
CLIC4-201ENST00000374379 C1RP00736 705 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms