RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 THEGQ9P2T0 379 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 FARP1Q9Y4F1 1045 aaPredicted RBP7.86□□□□□ -1.15
HERC4-202ENST00000373700 ATXN2Q99700 1313 aaKnown RBP7.86□□□□□ -1.15
HERC4-202ENST00000373700 E9PAM4 449 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 ABLIM1O14639 778 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 MRASO14807 208 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 FKBP6O75344 327 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 VPS26AO75436 327 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 PRKCGP05129 697 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 TPBGLP0DKB5 382 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 CCL5P13501 91 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 SKIV2L2P42285 1042 aaKnown RBP7.86□□□□□ -1.15
HERC4-202ENST00000373700 CCR10P46092 362 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 ENPEPQ07075 957 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 WASHC5Q12768 1159 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 NFYCQ13952 458 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 OTUD3Q5T2D3 398 aaPredicted RBP7.86□□□□□ -1.15
HERC4-202ENST00000373700 ARHGAP36Q6ZRI8 547 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 SETD3Q86TU7 594 aaPredicted RBP7.86□□□□□ -1.15
HERC4-202ENST00000373700 ZNF786Q8N393 782 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 PTGR2Q8N8N7 351 aaPredicted RBP7.86□□□□□ -1.15
HERC4-202ENST00000373700 ARL14EPQ8N8R7 260 aaPredicted RBP7.86□□□□□ -1.15
HERC4-202ENST00000373700 CXorf38Q8TB03 319 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 NAT14Q8WUY8 206 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 WDR60Q8WVS4 1066 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 SPATA17Q96L03 361 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 RPL10LQ96L21 214 aaKnown RBP7.86□□□□□ -1.15
HERC4-202ENST00000373700 TBATAQ96M53 351 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 TRIM15Q9C019 465 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 ZYG11BQ9C0D3 744 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 CCDC134Q9H6E4 229 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 PHIPQ8WWQ0 1821 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 STK25O00506 426 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 INPP4BO15327 924 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 TBL1XO60907 577 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 RTN3O95197 1032 aaPredicted RBP7.86□□□□□ -1.15
HERC4-202ENST00000373700 PARNO95453 639 aaKnown RBP7.86□□□□□ -1.15
HERC4-202ENST00000373700 ME2P23368 584 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 CRABP2P29373 138 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 CDH5P33151 784 aaPredicted RBP7.86□□□□□ -1.15
HERC4-202ENST00000373700 TAS2R39P59534 338 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 LRRC73Q5JTD7 316 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 CLEC6AQ6EIG7 209 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 AMIGO2Q86SJ2 522 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 MFN1Q8IWA4 741 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 FBXO39Q8N4B4 442 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 ACMSDQ8TDX5 336 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 ING5Q8WYH8 240 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 MRPL40Q9NQ50 206 aaKnown RBP7.86□□□□□ -1.15
HERC4-202ENST00000373700 FBXW11Q9UKB1 542 aa7.86□□□□□ -1.15
HERC4-202ENST00000373700 MBLAC1A4D2B0 266 aaPredicted RBP7.85□□□□□ -1.15
HERC4-202ENST00000373700 PSMD12O00232 456 aaPredicted RBP7.85□□□□□ -1.15
HERC4-202ENST00000373700 BIRC5O15392 142 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 CCL16O15467 120 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 KLF10Q13118 480 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 BIRC2Q13490 618 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 ARHGEF7Q14155 803 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 INPP5AQ14642 412 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 NR6A1Q15406 480 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 UPP1Q16831 310 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 PTPRNQ16849 979 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 FSTL5Q8N475 847 aaPredicted RBP7.85□□□□□ -1.15
HERC4-202ENST00000373700 ZNF778Q96MU6 729 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 SLC39A8Q9C0K1 460 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 POLR1EQ9GZS1 481 aaKnown RBP7.85□□□□□ -1.15
HERC4-202ENST00000373700 BRD8Q9H0E9 1235 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 RHOJQ9H4E5 214 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 GDAP2Q9NXN4 497 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 WWOXQ9NZC7 414 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 LMCD1Q9NZU5 365 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 DNMT3LQ9UJW3 386 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 PNMA8BQ9ULN7 279 aaPredicted RBP7.85□□□□□ -1.15
HERC4-202ENST00000373700 CNTN6Q9UQ52 1028 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 PCDHGC4Q9Y5F7 938 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 ORC6Q9Y5N6 252 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 CEP350Q5VT06 3117 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 CRTAMO95727 393 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 PIK3R1P27986 724 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 CORO1AP31146 461 aaKnown RBP7.85□□□□□ -1.15
HERC4-202ENST00000373700 APLP1P51693 650 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 PHEXP78562 749 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 RALGDSQ12967 914 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 RIPK1Q13546 671 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 PRKD1Q15139 912 aaPredicted RBP7.85□□□□□ -1.15
HERC4-202ENST00000373700 GPR158Q5T848 1215 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 TRNP1Q6NT89 227 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 PKN3Q6P5Z2 889 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 ZBTB49Q6ZSB9 765 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 NPAS4Q8IUM7 802 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 SPDYE1Q8NFV5 336 aaPredicted RBP7.85□□□□□ -1.15
HERC4-202ENST00000373700 DNAJB14Q8TBM8 379 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 UROC1Q96N76 676 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 RBBP8Q99708 897 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 ECSITQ9BQ95 431 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 C17orf80Q9BSJ5 609 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 TMEM161AQ9NX61 479 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 UBA2Q9UBT2 640 aaPredicted RBP7.85□□□□□ -1.15
HERC4-202ENST00000373700 SLC2A6Q9UGQ3 507 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 EGFL7Q9UHF1 273 aa7.85□□□□□ -1.15
HERC4-202ENST00000373700 PCDHB9Q9Y5E1 797 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms