RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 C9orf57Q5W0N0 161 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 WSCD1Q658N2 575 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 PCSK4Q6UW60 755 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 Q6YL49 198 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 ITIH5Q86UX2 942 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 LONP2Q86WA8 852 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 RALGPS2Q86X27 583 aaPredicted RBP5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 STKLD1Q8NE28 680 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 RASSF8Q8NHQ8 419 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 BPIFB1Q8TDL5 484 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 MSANTD3Q96H12 275 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 TMX3Q96JJ7 454 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 COQ10AQ96MF6 247 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 GCNAQ96QF7 691 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 PYM1Q9BRP8 204 aaKnown RBP5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 TEX101Q9BY14 249 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 TASP1Q9H6P5 420 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 C8orf33Q9H7E9 229 aaPredicted RBP5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 PARVGQ9HBI0 331 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 KCND2Q9NZV8 630 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 DKK2Q9UBU2 259 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 CPSF3Q9UKF6 684 aaKnown RBP5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 PACSIN3Q9UKS6 424 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 ODF2LQ9ULJ1 636 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 ASB3Q9Y575 518 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 GREB1Q4ZG55 1949 aa5.54□□□□□ -1.52
RNU4-4P-201ENST00000364588 ANO9A1A5B4 782 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 PIRO00625 290 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 CYB561D2O14569 222 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 SLC30A4O14863 429 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 TBCAO75347 108 aaKnown RBP5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 FGF19O95750 216 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 ADRB2P07550 413 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 GJB2P29033 226 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 CDC25CP30307 473 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 UBA7P41226 1012 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 TUFMP49411 452 aaKnown RBP5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 MCM2P49736 904 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 TAF6P49848 677 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 ZNF131P52739 623 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 ADKP55263 362 aaKnown RBP5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 OCA2Q04671 838 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 SF3A2Q15428 464 aaKnown RBP5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 ITPRIPL2Q3MIP1 535 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 HECTD2Q5U5R9 776 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 SDHAF4Q5VUM1 108 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 ARL6IP4Q66PJ3 421 aaKnown RBP5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 ADALQ6DHV7 355 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 C1orf228Q6PIY5 440 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 FOXR2Q6PJQ5 311 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 METTL23Q86XA0 190 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 VRK3Q8IV63 474 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 CD302Q8IX05 232 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 EFCAB13Q8IY85 973 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 FITM2Q8N6M3 262 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 MAB21L3Q8N8X9 362 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 CALML4Q96GE6 196 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 FIZ1Q96SL8 496 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 ZCWPW1Q9H0M4 648 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 ARRDC1-AS1Q9H2J1 176 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 TOR3AQ9H497 397 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 EBF3Q9H4W6 596 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 HPS4Q9NQG7 708 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 GKN1Q9NS71 199 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 BLOC1S4Q9NUP1 217 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 TMLHEQ9NVH6 421 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 FBXO34Q9NWN3 711 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 DPP3Q9NY33 737 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 OBP2AQ9NY56 170 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 AGO2Q9UKV8 859 aaKnown RBP5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 MAGED2Q9UNF1 606 aaPredicted RBP5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 CCL26Q9Y258 94 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 KIF3AQ9Y496 699 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 CFAP20Q9Y6A4 193 aaKnown RBP5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 SPAG17Q6Q759 2223 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 SDK1Q7Z5N4 2213 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 MYO16Q9Y6X6 1858 aa5.53□□□□□ -1.52
RNU4-4P-201ENST00000364588 NCOR2Q9Y618 2525 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 SPTBN2O15020 2390 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 UNC119BA6NIH7 251 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 KPNA7A9QM74 516 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 KIAA0391O15091 583 aaKnown RBP5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 LRP3O75074 770 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 SPDEFO95238 335 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 PAPSS2O95340 614 aaPredicted RBP5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 GPANK1O95872 356 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 EGFP01133 1207 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 CCDC192P0DO97 292 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 HKR1P10072 659 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 HAPLN1P10915 354 aaPredicted RBP5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 MTHFD1P11586 935 aaKnown RBP5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 ARSAP15289 507 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 ACAT1P24752 427 aaKnown RBP5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 AVPR1AP37288 418 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 GTF2BQ00403 316 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 BFSP1Q12934 665 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 RESTQ13127 1097 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 TARDBPQ13148 414 aaKnown RBP eCLIP5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 RUNX3Q13761 415 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms