RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 TSPAN6O43657 245 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 ZNF500O60304 480 aaPredicted RBP13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 NUDT1P36639 197 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 FDFT1P37268 417 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 TNNT3P45378 269 aaPredicted RBP13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 GEMP55040 296 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 GDF10P55107 478 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 ELP6Q0PNE2 266 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 TCF15Q12870 199 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 SNX1Q13596 522 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 WHAMMP3Q1A5X7 153 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 ERAP2Q6P179 960 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 CCDC137Q6PK04 289 aaKnown RBP13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 PARS2Q7L3T8 475 aaKnown RBP13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 GSTA5Q7RTV2 222 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 ZNF572Q7Z3I7 529 aaPredicted RBP13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 TTC7BQ86TV6 843 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 OR2T34Q8NGX1 318 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 CCDC110Q8TBZ0 833 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 CCHCR1Q8TD31 782 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 FOXJ1Q92949 421 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 ERLEC1Q96DZ1 483 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 TOE1Q96GM8 510 aaKnown RBP13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 ZC3H10Q96K80 434 aaKnown RBP13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 CAPZA3Q96KX2 299 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 SRPK1Q96SB4 655 aaKnown RBP13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 RBM15Q96T37 977 aaKnown RBP eCLIP13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 CEP41Q9BYV8 373 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 C10orf88Q9H8K7 445 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 SERGEFQ9UGK8 458 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 PCDHGC4Q9Y5F7 938 aa13.94□□□□□ -0.18
NSMCE1-201ENST00000361439 UPK3BL1B0FP48 263 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 C10orf142B7Z368 130 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 UPK3BL2E5RIL1 263 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 AREL1O15033 823 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 NDUFS2O75306 463 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 GJB3O75712 270 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 SEMA4FO95754 770 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 GAS8O95995 478 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 IFNB1P01574 187 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 TIMP2P16035 220 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 XPAP23025 273 aaPredicted RBP13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 ADPRHP54922 357 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 CDK18Q07002 472 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 CKAP4Q07065 602 aaKnown RBP13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 TRAF2Q12933 501 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 CCDC70Q6NSX1 233 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 SYDE1Q6ZW31 735 aaPredicted RBP13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 CACUL1Q86Y37 369 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 RAVER1Q8IY67 606 aaKnown RBP13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 PRSS33Q8NF86 280 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 OR14C36Q8NHC7 312 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 FEM1CQ96JP0 617 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 NSMCE3Q96MG7 304 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 DUSP15Q9H1R2 295 aaPredicted RBP13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 PCDH9Q9HC56 1237 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 PCDHB9Q9Y5E1 797 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 FADS3Q9Y5Q0 445 aa13.93□□□□□ -0.18
NSMCE1-201ENST00000361439 PLXND1Q9Y4D7 1925 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 LOC285095A0A1B0GVY8 99 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 TTC24A2A3L6 582 aaPredicted RBP13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 H0Y858 1186 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 PDE2AO00408 941 aaPredicted RBP13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 MAP3K13O43283 966 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 HRO43593 1189 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 URI1O94763 535 aaPredicted RBP13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 RHOBTB1O94844 696 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 ECEL1O95672 775 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 CPP00450 1065 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 PRLP01236 227 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 DEKP35659 375 aaKnown RBP13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 DPP6P42658 865 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 KCNJ1P48048 391 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 GRIA4P48058 902 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 CCR5P51681 352 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 METAP1P53582 386 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 IHHQ14623 411 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 POM121L1PQ3SYA9 428 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 KIAA1161Q6NSJ0 714 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 TTC27Q6P3X3 843 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 KDELC1Q6UW63 502 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 USP45Q70EL2 814 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 TRIM69Q86WT6 500 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 SPATA4Q8NEY3 305 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 SPATA22Q8NHS9 363 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 PIH1D2Q8WWB5 315 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 RLN3Q8WXF3 142 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 ZNF592Q92610 1267 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 IFT43Q96FT9 208 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 SCRN2Q96FV2 425 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 MCCC1Q96RQ3 725 aaPredicted RBP13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 TRIB3Q96RU7 358 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 LYSMD1Q96S90 227 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 EPC1Q9H2F5 836 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 LRRC40Q9H9A6 602 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 SMARCAL1Q9NZC9 954 aa13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 MBD1Q9UIS9 605 aaPredicted RBP13.92□□□□□ -0.18
NSMCE1-201ENST00000361439 ESPNB1AK53 854 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms