RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 COL4A2P08572 1712 aa12.95□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 A6NNZ2 444 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 LOC730098B7Z3J9 87 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 ATP9BO43861 1147 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 AP1S1P61966 158 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 CBX1P83916 185 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 PCSK7Q16549 785 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 AAK1Q2M2I8 961 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 TUBB8Q3ZCM7 444 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SIRPB2Q5JXA9 342 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 MARK2Q7KZI7 788 aaKnown RBP12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 TAOK1Q7L7X3 1001 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 NLRP9Q7RTR0 991 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SRLQ86TD4 932 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 EXOC3L1Q86VI1 746 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 PLPP6Q8IY26 295 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 PHTF2Q8N3S3 785 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SLC44A3Q8N4M1 653 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 CPA6Q8N4T0 437 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 PPHLN1Q8NEY8 458 aaKnown RBP12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 CDKL2Q92772 493 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 IFT43Q96FT9 208 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 NSMCE3Q96MG7 304 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 TRIM56Q9BRZ2 755 aaKnown RBP12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 CEP44Q9C0F1 390 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 CHRAC1Q9NRG0 131 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SMYD2Q9NRG4 433 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 GTSE1Q9NYZ3 720 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 CTNNAL1Q9UBT7 734 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 LIMD1Q9UGP4 676 aa12.94□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 TTC24A2A3L6 582 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 HEATR9A2RTY3 570 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 CXorf49A8MYA2 514 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 TRIM24O15164 1050 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 TULP3O75386 442 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 ZNF821O75541 412 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 PRLP01236 227 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 INHBAP08476 426 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 PSMA3P25788 255 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 GJA4P35212 333 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 OPRD1P41143 372 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 CHRNA4P43681 627 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 RHOAP61586 193 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 PPP2R2AP63151 447 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 EFTUD2Q15029 972 aaKnown RBP eCLIP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 FUT11Q495W5 492 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 LGSNQ5TDP6 509 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 ADIPOR2Q86V24 386 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 TRABD2AQ86V40 505 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 AHI1Q8N157 1196 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 WFIKKN2Q8TEU8 576 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 ZNF669Q96BR6 464 aaPredicted RBP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 CERS2Q96G23 380 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 TDRD1Q9BXT4 1180 aaKnown RBP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 CNOT10Q9H9A5 744 aaKnown RBP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 TRPV5Q9NQA5 729 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 TREX1Q9NSU2 369 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 FAM50BQ9Y247 325 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 IKBKGQ9Y6K9 419 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 IQANK1A0A1B0GTG1 560 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 MROH6A6NGR9 719 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SMAD6O43541 496 aaKnown RBP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 FZD6O60353 706 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 GJB3O75712 270 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SRCP12931 536 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 CA4P22748 312 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 CNTFP26441 200 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SERPINB9P50453 376 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 RPL26P61254 145 aaKnown RBP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 ECT2LQ008S8 904 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 MESP2Q0VG99 397 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 DNAJC3Q13217 504 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 ITPRIPL2Q3MIP1 535 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 TMEM215Q68D42 235 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SLC25A41Q8N5S1 370 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 PPM1NQ8N819 430 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 NAT16Q8N8M0 369 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 BRSK1Q8TDC3 778 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 MZB1Q8WU39 189 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 MFSD3Q96ES6 412 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 BRD9Q9H8M2 597 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SSU72Q9NP77 194 aaKnown RBP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 RPL26L1Q9UNX3 145 aaKnown RBP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 FCF1Q9Y324 198 aaKnown RBP12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 RAI2Q9Y5P3 530 aa12.93□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 KIAA1549LQ6ZVL6 1849 aa12.92□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 MUC3AQ02505 3323 aa12.92□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 K7ERQ8 282 aa12.92□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SIN3BO75182 1162 aa12.92□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 GSRP00390 522 aa12.92□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 NMBRP28336 390 aa12.92□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SLC6A11P48066 632 aa12.92□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 NUMBP49757 651 aa12.92□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 SLC18A1P54219 525 aa12.92□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 ACVR1Q04771 509 aa12.92□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 POU6F1Q14863 301 aa12.92□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 GEN1Q17RS7 908 aa12.92□□□□□ -0.34
SHANK2-AS3-201ENST00000307548 DGKKQ5KSL6 1271 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms