RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 GLT1D1Q96MS3 346 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 C2orf40Q9H1Z8 148 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 SNX25Q9H3E2 840 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 DPP3Q9NY33 737 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.34□□□□□ -0.75
LMX1A-201ENST00000294816 VPS51Q9UID3 782 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 USP21Q9UK80 565 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 FAM95CA0A1B0GW59 222 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 EEF2KO00418 725 aaKnown RBP10.34□□□□□ -0.75
LMX1A-201ENST00000294816 TOMM70O94826 608 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 NFKB1P19838 968 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 CHRM3P20309 590 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 PRKAA2P54646 552 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 HMGCS2P54868 508 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 GJA9P57773 515 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 PPIL2Q13356 520 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 RPS6KA2Q15349 733 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 FAM83EQ2M2I3 478 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 VPS26BQ4G0F5 336 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 SLC2A7Q6PXP3 512 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 UTS2BQ765I0 119 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 PIWIL3Q7Z3Z3 882 aaKnown RBP10.34□□□□□ -0.75
LMX1A-201ENST00000294816 BTLAQ7Z6A9 289 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 TMEM135Q86UB9 458 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 ZNF354CQ86Y25 554 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 CEP97Q8IW35 865 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 DEFB106AQ8N104 65 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 ISL2Q96A47 359 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 NRBF2Q96F24 287 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 SLC45A3Q96JT2 553 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 GPR22Q99680 433 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 HERC2P3Q9BVR0 1158 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 FTHL17Q9BXU8 183 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 RHOJQ9H4E5 214 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 RAD21L1Q9H4I0 556 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 ACAD9Q9H845 621 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 TNFRSF12AQ9NP84 129 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 TBC1D13Q9NVG8 400 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 GPRC5DQ9NZD1 345 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 SLC27A5Q9Y2P5 690 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 ZBBXA8MT70 800 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 A8MU76 341 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 DLGAP1O14490 977 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 ANGPT2O15123 496 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 GMNNO75496 209 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 SULT1C4O75897 302 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 GABBR2O75899 941 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 AP2A1O95782 977 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 PGK1P00558 417 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 AHSGP02765 367 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 ALBP02768 609 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 PTPN3P26045 913 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 CAPGP40121 348 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 SNX16P57768 344 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 RBP5P82980 135 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 PGS1Q32NB8 556 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 SLC36A3Q495N2 470 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 DCLRE1AQ6PJP8 1040 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 CUZD1Q86UP6 607 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 SCAIQ8N9R8 606 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 HEXDCQ8WVB3 486 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 C1QTNF1Q9BXJ1 281 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 OSBPL2Q9H1P3 480 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 SMPD3Q9NY59 655 aaPredicted RBP10.34□□□□□ -0.75
LMX1A-201ENST00000294816 CD300AQ9UGN4 299 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 SEPT3Q9UH03 358 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 MRPL42Q9Y6G3 142 aaKnown RBP10.34□□□□□ -0.75
LMX1A-201ENST00000294816 ARID2Q68CP9 1835 aa10.34□□□□□ -0.75
LMX1A-201ENST00000294816 NRXN2Q9P2S2 1712 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 NME4O00746 187 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 POLR2IP36954 125 aaKnown RBP10.33□□□□□ -0.76
LMX1A-201ENST00000294816 OPRL1P41146 370 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 RAB10P61026 200 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 TARBP2Q15633 366 aaKnown RBP10.33□□□□□ -0.76
LMX1A-201ENST00000294816 TSTD2Q5T7W7 516 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 SULF1Q8IWU6 871 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 TMEM151AQ8N4L1 468 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 MFSD2AQ8NA29 543 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 GABPB2Q8TAK5 448 aaPredicted RBP10.33□□□□□ -0.76
LMX1A-201ENST00000294816 TRUB1Q8WWH5 349 aaKnown RBP10.33□□□□□ -0.76
LMX1A-201ENST00000294816 CENPNQ96H22 339 aaPredicted RBP10.33□□□□□ -0.76
LMX1A-201ENST00000294816 DNAI2Q9GZS0 605 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 DPEP3Q9H4B8 488 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 CCM2LQ9NUG4 571 aaPredicted RBP10.33□□□□□ -0.76
LMX1A-201ENST00000294816 TMEM181Q9P2C4 612 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 DSEQ9UL01 958 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 MTF2Q9Y483 593 aaPredicted RBP10.33□□□□□ -0.76
LMX1A-201ENST00000294816 DYNC1LI2O43237 492 aaPredicted RBP10.33□□□□□ -0.76
LMX1A-201ENST00000294816 CLPXO76031 633 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 SUPT7LO94864 414 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 ALDH2P05091 517 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 INHBBP09529 407 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 RPS9P46781 194 aaKnown RBP10.33□□□□□ -0.76
LMX1A-201ENST00000294816 MLLT10P55197 1068 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 DNASE1L3Q13609 305 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 TMEM132BQ14DG7 1078 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 LY6KQ17RY6 165 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 PIWIL4Q7Z3Z4 852 aaKnown RBP10.33□□□□□ -0.76
LMX1A-201ENST00000294816 PNPLA1Q8N8W4 532 aa10.33□□□□□ -0.76
LMX1A-201ENST00000294816 UHRF1Q96T88 793 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms