RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 J3QRK9 145 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 DLGAP1O14490 977 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 NMBRP28336 390 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 GRM5P41594 1212 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 SLC26A2P50443 739 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 PRKCQQ04759 706 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 CD300CQ08708 224 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 IFRD2Q12894 506 aaPredicted RBP11.45□□□□□ -0.58
SCLT1-201ENST00000281142 NAB1Q13506 487 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 DPYSQ14117 519 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 FGD3Q5JSP0 725 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 C6orf10Q5SRN2 563 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 IL31Q6EBC2 164 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 TMEM110Q86TL2 294 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 SLC7A14Q8TBB6 771 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 ARMC5Q96C12 935 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 FBXL8Q96CD0 374 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 VPS50Q96JG6 964 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 CLK4Q9HAZ1 481 aaKnown RBP11.45□□□□□ -0.58
SCLT1-201ENST00000281142 XPR1Q9UBH6 696 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 FUOMA2VDF0 154 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 MPOP05164 745 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 ADORA2BP29275 332 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 YBX1P67809 324 aaKnown RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 PRKAA1Q13131 559 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 MAP7D1Q3KQU3 841 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 PKDCCQ504Y2 493 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 GPR107Q5VW38 600 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 CNSTQ6PJW8 725 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 TMEM26Q6ZUK4 368 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 LYSMD3Q7Z3D4 306 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 KCNMB4Q86W47 210 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 CENPLQ8N0S6 344 aaPredicted RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 SLC35F5Q8WV83 523 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 CANT1Q8WVQ1 401 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 LRCH3Q96II8 777 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 RPL10LQ96L21 214 aaKnown RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 C11orf84Q9BUA3 381 aaPredicted RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 MCOLN1Q9GZU1 580 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 FZD8Q9H461 694 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 PDZD7Q9H5P4 517 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 SOX17Q9H6I2 414 aaPredicted RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 GTSE1Q9NYZ3 720 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 ADAM28Q9UKQ2 775 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 TRIP12Q14669 1992 aaPredicted RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 HAS3O00219 553 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 AKAP10O43572 662 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 FUCA1P04066 466 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 ATP6V1B2P21281 511 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 ACADVLP49748 655 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 MBTD1Q05BQ5 628 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 INCA1Q0VD86 236 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 BNIP3Q12983 259 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 PMS2P3Q13401 168 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 ATP1A4Q13733 1029 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 RFTN1Q14699 578 aaPredicted RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 MFSD10Q14728 455 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 AGKQ53H12 422 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 DCAF6Q58WW2 860 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 REP15Q6BDI9 236 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 LRRC8EQ6NSJ5 796 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 SLC2A7Q6PXP3 512 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 RNF180Q86T96 592 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 SETD3Q86TU7 594 aaPredicted RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 NT5DC4Q86YG4 428 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 OFCC1Q8IZS5 231 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 CNTD1Q8N815 330 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 PNPLA1Q8N8W4 532 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 COX4I2Q96KJ9 171 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 ANKRD60Q9BZ19 345 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 TRIM8Q9BZR9 551 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 OSBPL2Q9H1P3 480 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 LRRC40Q9H9A6 602 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 CYP3A43Q9HB55 503 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 CACNA2D2Q9NY47 1150 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 KLHL8Q9P2G9 620 aaPredicted RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 IGSF9Q9P2J2 1179 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 COQ6Q9Y2Z9 468 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 FAM32AQ9Y421 112 aaKnown RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 FADS3Q9Y5Q0 445 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 TRIM24O15164 1050 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 SLC35E2BP0CK96 405 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 INSRRP14616 1297 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 SOX11P35716 441 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 YAP1P46937 504 aaKnown RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 LRP8Q14114 963 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 SPIDRQ14159 915 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 USP10Q14694 798 aaKnown RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 HERC3Q15034 1050 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 AARS2Q5JTZ9 985 aaKnown RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 TMEM135Q86UB9 458 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 EPHX4Q8IUS5 362 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 MFSD6LQ8IWD5 586 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 CBR4Q8N4T8 237 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 SREK1Q8WXA9 508 aaKnown RBP11.44□□□□□ -0.58
SCLT1-201ENST00000281142 TANKQ92844 425 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 NXNL1Q96CM4 212 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 FBXL20Q96IG2 436 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 SLC45A3Q96JT2 553 aa11.44□□□□□ -0.58
SCLT1-201ENST00000281142 FAM167AQ96KS9 214 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms