RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 HERC3Q15034 1050 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 HSP90AA5PQ58FG0 334 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 TMEM135Q86UB9 458 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 MOCOSQ96EN8 888 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 DNAJC1Q96KC8 554 aaKnown RBP17.14■□□□□ 0.33
FOXA1-201ENST00000250448 CATSPER2Q96P56 530 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 PKP2Q99959 881 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 ACE2Q9BYF1 805 aaPredicted RBP17.14■□□□□ 0.33
FOXA1-201ENST00000250448 WDR41Q9HAD4 459 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 BFARQ9NZS9 450 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 MICAL3Q7RTP6 2002 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 M0QYT0 321 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 TIMM44O43615 452 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 PIGNO95427 931 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 APOA4P06727 396 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 CLTBP09497 229 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 FAM58BPP0C7Q3 252 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 CCR10P46092 362 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 CSE1LP55060 971 aaKnown RBP17.14■□□□□ 0.33
FOXA1-201ENST00000250448 MPP3Q13368 585 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 MYLK3Q32MK0 819 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 CTXN3Q4LDR2 81 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 C6orf52Q5T4I8 152 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 RSPO2Q6UXX9 243 aaPredicted RBP17.14■□□□□ 0.33
FOXA1-201ENST00000250448 ZYG11AQ6WRX3 759 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 ATAD1Q8NBU5 361 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 NUF2Q9BZD4 464 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 MYOCOSA0A1B0GUC4 107 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 TRIM43BA6NCK2 446 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 TK2O00142 265 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 GRID2O43424 1007 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 AP2A1O95782 977 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 GALTP07902 379 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 NCAM1P13591 858 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 ME2P23368 584 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 GRIA4P48058 902 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 INHBCP55103 352 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 USP46P62068 366 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 CDKL1Q00532 357 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 DDR2Q16832 855 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 USP41Q3LFD5 358 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 RTP2Q5QGT7 225 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 LIPMQ5VYY2 423 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 PSTKQ8IV42 348 aaKnown RBP17.13■□□□□ 0.33
FOXA1-201ENST00000250448 RNF148Q8N7C7 305 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 ACVR1CQ8NER5 493 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 RDH11Q8TC12 318 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 TRIM43Q96BQ3 446 aaPredicted RBP17.13■□□□□ 0.33
FOXA1-201ENST00000250448 PRPF18Q99633 342 aaKnown RBP17.13■□□□□ 0.33
FOXA1-201ENST00000250448 C11orf49Q9H6J7 331 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 NUDT5Q9UKK9 219 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 CDYLQ9Y232 598 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 NLRC5Q86WI3 1866 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 KCNK1O00180 336 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 BCAS2O75934 225 aaPredicted RBP17.13■□□□□ 0.33
FOXA1-201ENST00000250448 ADSLP30566 484 aaPredicted RBP17.13■□□□□ 0.33
FOXA1-201ENST00000250448 DPP6P42658 865 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 PAFAH1B3Q15102 231 aaKnown RBP17.13■□□□□ 0.33
FOXA1-201ENST00000250448 RAB41Q5JT25 222 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 IYDQ6PHW0 289 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 PRSS55Q6UWB4 352 aaPredicted RBP17.13■□□□□ 0.33
FOXA1-201ENST00000250448 BHLHA9Q7RTU4 235 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 KCNMB4Q86W47 210 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 TP53INP2Q8IXH6 220 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 ARL10Q8N8L6 244 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 DNAAF3Q8N9W5 541 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 VPS39Q96JC1 886 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 IL22Q9GZX6 179 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 TASP1Q9H6P5 420 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 CSNK1G1Q9HCP0 422 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 PIGVQ9NUD9 493 aa17.13■□□□□ 0.33
FOXA1-201ENST00000250448 FNDC1Q4ZHG4 1894 aaPredicted RBP17.13■□□□□ 0.33
FOXA1-201ENST00000250448 TMEM189-UBE2V1I3L0A0 370 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 DAB1O75553 588 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 DEFB103AP81534 67 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 NSUN2Q08J23 767 aaKnown RBP eCLIP17.12■□□□□ 0.33
FOXA1-201ENST00000250448 PRKAA1Q13131 559 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 IKBKEQ14164 716 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 SLC25A52Q3SY17 297 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 ARL13AQ5H913 290 aaPredicted RBP17.12■□□□□ 0.33
FOXA1-201ENST00000250448 TMEM198Q66K66 360 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 FUT10Q6P4F1 479 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 GALNT4Q8N4A0 578 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 ZFP28Q8NHY6 868 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 DDI1Q8WTU0 396 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 PDCD6IPQ8WUM4 868 aaKnown RBP17.12■□□□□ 0.33
FOXA1-201ENST00000250448 STON2Q8WXE9 905 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 MFSD3Q96ES6 412 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 CASS4Q9NQ75 786 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 HSFX1Q9UBD0 423 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 OAZ2O95190 189 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 CAPNS1P04632 268 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 RPL17P18621 184 aaKnown RBP17.12■□□□□ 0.33
FOXA1-201ENST00000250448 PTPN3P26045 913 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 ATXN3P54252 364 aaPredicted RBP17.12■□□□□ 0.33
FOXA1-201ENST00000250448 ART3Q13508 389 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 SH2D4BQ5SQS7 431 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 NXNQ6DKJ4 435 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 ARMC5Q96C12 935 aa17.12■□□□□ 0.33
FOXA1-201ENST00000250448 KLHL32Q96NJ5 620 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms