RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 CLK4Q9HAZ1 481 aaKnown RBP13.84□□□□□ -0.19
NFKB1-201ENST00000226574 CACYBPQ9HB71 228 aaKnown RBP13.84□□□□□ -0.19
NFKB1-201ENST00000226574 TBC1D13Q9NVG8 400 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 GIMAP2Q9UG22 337 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 OR51F1A6NGY5 319 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 PMM2O15305 246 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 GCATO75600 419 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 GGT5P36269 586 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 PSMD7P51665 324 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 DDR2Q16832 855 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 CTXN3Q4LDR2 81 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 TLDC1Q6P9B6 456 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 TP53INP2Q8IXH6 220 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 CFAP52Q8N1V2 620 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 TNIP2Q8NFZ5 429 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 SKA1Q96BD8 255 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 TBATAQ96M53 351 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 NIFKQ9BYG3 293 aaKnown RBP13.84□□□□□ -0.19
NFKB1-201ENST00000226574 MRPS26Q9BYN8 205 aaKnown RBP13.84□□□□□ -0.19
NFKB1-201ENST00000226574 SIX4Q9UIU6 781 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 ANKRD6Q9Y2G4 727 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 KIF1AQ12756 1690 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 ATP5BP06576 529 aaKnown RBP13.83□□□□□ -0.2
NFKB1-201ENST00000226574 CDH2P19022 906 aaPredicted RBP13.83□□□□□ -0.2
NFKB1-201ENST00000226574 PTPN3P26045 913 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 SOAT1P35610 550 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 CCNG1P51959 295 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 SLC18A2Q05940 514 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 NR1D2Q14995 579 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 HFE2Q6ZVN8 426 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 SLC26A9Q7LBE3 791 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 DCP1BQ8IZD4 617 aaKnown RBP13.83□□□□□ -0.2
NFKB1-201ENST00000226574 ZNF276Q8N554 614 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 HEXDCQ8WVB3 486 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 SH3KBP1Q96B97 665 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 QKIQ96PU8 341 aaKnown RBP eCLIP13.83□□□□□ -0.24e-6■■□□□ 12
NFKB1-201ENST00000226574 VAT1Q99536 393 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 ZNF112Q9UJU3 913 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 MTF2Q9Y483 593 aaPredicted RBP13.83□□□□□ -0.2
NFKB1-201ENST00000226574 ROBO1Q9Y6N7 1651 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 H3BMM5 538 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 WDR47O94967 919 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 MBTD1Q05BQ5 628 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 CACHD1Q5VU97 1274 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 TMEM214Q6NUQ4 689 aaKnown RBP13.83□□□□□ -0.2
NFKB1-201ENST00000226574 FAM43BQ6ZT52 329 aaPredicted RBP13.83□□□□□ -0.2
NFKB1-201ENST00000226574 GLT6D1Q7Z4J2 308 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 C11orf96Q7Z7L8 435 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 ADCY4Q8NFM4 1077 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 VPS33AQ96AX1 596 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 CYP2S1Q96SQ9 504 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 PKP2Q99959 881 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 DUSP16Q9BY84 665 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 TM6SF2Q9BZW4 377 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 ZDHHC2Q9UIJ5 367 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 LAMA4Q16363 1823 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 C9IYK1 514 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 TOR1BO14657 336 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 SIX3O95343 332 aaPredicted RBP13.83□□□□□ -0.2
NFKB1-201ENST00000226574 RAD23AP54725 363 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 GJA9P57773 515 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 MADCAM1Q13477 382 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 CNSTQ6PJW8 725 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 LBX2Q6XYB7 198 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 CHST15Q7LFX5 561 aaPredicted RBP13.83□□□□□ -0.2
NFKB1-201ENST00000226574 PLPPR4Q7Z2D5 763 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 NECAB2Q7Z6G3 386 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 CARNMT1Q8N4J0 409 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 PQLC3Q8N755 202 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 SPPL2AQ8TCT8 520 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 CANT1Q8WVQ1 401 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 RORBQ92753 470 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 TCF12Q99081 682 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 KATNAL1Q9BW62 490 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 PRKD2Q9BZL6 878 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 HAPLN2Q9GZV7 340 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 ZFYVE28Q9HCC9 887 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 PNPLA3Q9NST1 481 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 VPS28Q9UK41 221 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 ADAM28Q9UKQ2 775 aa13.83□□□□□ -0.2
NFKB1-201ENST00000226574 ZNF197O14709 1029 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 AP2A1O95782 977 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 FGFR1P11362 822 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 ZNF37AP17032 561 aaPredicted RBP13.82□□□□□ -0.2
NFKB1-201ENST00000226574 YWHAQP27348 245 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 ALDH4A1P30038 563 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 HALP42357 657 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 OXCT1P55809 520 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 AP5B1Q2VPB7 878 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 ADCK2Q7Z695 626 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 TLK2Q86UE8 772 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 SYTL1Q8IYJ3 562 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 LGI2Q8N0V4 545 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 OSBPL11Q9BXB4 747 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 RHOBTB2Q9BYZ6 727 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 STN1Q9H668 368 aaKnown RBP13.82□□□□□ -0.2
NFKB1-201ENST00000226574 WDR70Q9NW82 654 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 SEPT3Q9UH03 358 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 SLC27A5Q9Y2P5 690 aa13.82□□□□□ -0.2
NFKB1-201ENST00000226574 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms