RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 GIT1Q9Y2X7 761 aa13.04□□□□□ -0.32
PCDHB4-201ENST00000194152 KCTD3Q9Y597 815 aa13.04□□□□□ -0.32
PCDHB4-201ENST00000194152 AP4B1Q9Y6B7 739 aa13.04□□□□□ -0.32
PCDHB4-201ENST00000194152 TRIP11Q15643 1979 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 AXIN1O15169 862 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 TM7SF2O76062 418 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 PTPN9P43378 593 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 ALDH1A3P47895 512 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 HARS2P49590 506 aaKnown RBP13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 OXCT1P55809 520 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 LRRC73Q5JTD7 316 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 LRRC8EQ6NSJ5 796 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 ZMIZ2Q8NF64 920 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 APOL5Q9BWW9 433 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 ILKAPQ9H0C8 392 aaPredicted RBP13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 UXTQ9UBK9 157 aaPredicted RBP13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 FAM58BPP0C7Q3 252 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 CHRM3P20309 590 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 FGFR3P22607 806 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 ACTR3P61158 418 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 ADGRD1Q6QNK2 874 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 ZNF467Q7Z7K2 595 aaPredicted RBP13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 TMEM86AQ8N2M4 240 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 HBEGFQ99075 208 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 GPR62Q9BZJ7 368 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 GPAMQ9HCL2 828 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 ITM2AO43736 263 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 SH3BGRLO75368 114 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 C2P06681 752 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 PGAM1P18669 254 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 PKNOX1P55347 436 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 WNT3AP56704 352 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 CDH17Q12864 832 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 KCNJ11Q14654 390 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 PDPK2PQ6A1A2 396 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 PAQR9Q6ZVX9 377 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 NUP93Q8N1F7 819 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 SLCO2A1Q92959 643 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 CMTM5Q96DZ9 223 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 SMIM14Q96QK8 99 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 KATNBL1Q9H079 304 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 PALMDQ9NP74 551 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 TEX264Q9Y6I9 313 aa13.03□□□□□ -0.32
PCDHB4-201ENST00000194152 LTBP1Q14766 1721 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 ARHGEF37A1IGU5 675 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 F5H5T6 163 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 KLHL2O95198 593 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 TNFAIP8O95379 198 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 CTPS1P17812 591 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 TCEA2Q15560 299 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 MAPRE1Q15691 268 aaKnown RBP13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 TEX44Q53QW1 395 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 MORN1Q5T089 497 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 SLC24A5Q71RS6 500 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 DDI1Q8WTU0 396 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 HDAC10Q969S8 669 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 GFM2Q969S9 779 aaKnown RBP13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 SEMA6AQ9H2E6 1030 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 VPS28Q9UK41 221 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 ADAMTS6Q9UKP5 1117 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 ANGPTL3Q9Y5C1 460 aa13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 COL11A1P12107 1806 aaPredicted RBP13.02□□□□□ -0.32
PCDHB4-201ENST00000194152 TCRBV5S1A1TA0A578 114 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 E5RI56 91 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 GJB3O75712 270 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 PTPN7P35236 360 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 GRM3Q14832 879 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 CARTPTQ16568 116 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 NFE2Q16621 373 aaPredicted RBP13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 SMYD1Q8NB12 490 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 GAB3Q8WWW8 586 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 QKIQ96PU8 341 aaKnown RBP eCLIP13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 ATP13A1Q9HD20 1204 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 ABCC13Q9NSE7 274 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 THAP1Q9NVV9 213 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 DCDC2Q9UHG0 476 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 PCDHGC4Q9Y5F7 938 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 ZNF831Q5JPB2 1677 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 BCLAF3A2AJT9 711 aaKnown RBP13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 CKBP12277 381 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 KPNA2P52292 529 aaKnown RBP13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 SLC10A7Q0GE19 358 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 BTG3Q14201 252 aaPredicted RBP13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 GK3PQ14409 553 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 TMC7Q7Z402 723 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 PDSS2Q86YH6 399 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 HMCESQ96FZ2 354 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 LGALS13Q9UHV8 139 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 FBXW11Q9UKB1 542 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 DMTF1Q9Y222 760 aa13.02□□□□□ -0.33
PCDHB4-201ENST00000194152 A0A0U1RQF3 1178 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 PIGNO95427 931 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 GSTT2P0CG29 244 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 GSTT2BP0CG30 244 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 MYL4P12829 197 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 STMN1P16949 149 aa13.01□□□□□ -0.33
PCDHB4-201ENST00000194152 WARSP23381 471 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms