RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Gtf3c2Q8BL74 907 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Parp12Q8BZ20 711 aaKnown RBP18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Parp9Q8CAS9 866 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Zfp263Q8CF60 680 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 DdoQ922Z0 341 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Stard13Q923Q2 1113 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Hars2Q99KK9 505 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Rnf146Q9CZW6 359 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Klhdc8bQ9D2D9 354 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Ankrd7Q9D504 279 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Tlr9Q9EQU3 1032 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Elovl2Q9JLJ4 292 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Hacl1Q9QXE0 581 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Asb4Q9WV71 426 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 CpqQ9WVJ3 470 aa18.67■□□□□ 0.58
Vti1b-201ENSMUST00000055262 CatsperbA2RTF1 1109 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Ddx43D3Z6P9 646 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Wdr95D3Z7A8 784 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Gm3542K7N6U2 270 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Vmn1r86L7N213 316 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 AlyrefO08583 255 aaKnown RBP18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Srsf5O35326 269 aaKnown RBP18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Chrna4O70174 629 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Pdia4P08003 638 aaKnown RBP18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Atf2P16951 487 aaKnown RBP18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 CryaaP24622 196 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Atxn10P28658 475 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Ephb2P54763 986 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Tubal3Q3UX10 446 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Gcnt3Q5JCT0 437 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Elavl3Q60900 367 aaKnown RBP18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Zdhhc24Q6IR37 284 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Nudcd1Q6PIP5 582 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Zbtb41Q811F1 908 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Fam72aQ8BFZ8 149 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 MtbpQ8BJS8 894 aaKnown RBP18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Tmem72Q8C3K5 275 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Evi2bQ8VD58 444 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Bcl7aQ9CXE2 210 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Senp8Q9D2Z4 221 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Efcab9Q9DAM2 216 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Drg2Q9QXB9 364 aaKnown RBP18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Cyb561d2Q9WUE3 222 aa18.66■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Zbtb34A2ATY4 518 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Cylc2B1AWN8 422 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Siah3B2RWG3 268 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Ifi206G3UZV2 921 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Pabpc4lG5E8X2 370 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Gm7995L7N2E4 160 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Nthl1O35980 300 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Cd19P25918 547 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 GemP55041 295 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Gm10488Q4KL05 212 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Nt5eQ61503 576 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Ankrd6Q69ZU8 712 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Inpp4bQ6P1Y8 924 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Atl2Q6PA06 583 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Znf775Q8BI73 538 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Nup85Q8R480 656 aaKnown RBP18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Olfr371Q8VGB8 312 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Camk1Q91YS8 374 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 MicalclQ9D5U9 680 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 NagaQ9QWR8 415 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Kifc1Q9QWT9 674 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Irx4Q9QY61 515 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Tsga10ipF7A1F0 157 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 FaahO08914 579 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 PbsnO08976 174 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 CrymO54983 313 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Cyp2b19O55071 492 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 ChkbO55229 394 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 F3P20352 294 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Hsd17b4P51660 735 aaKnown RBP18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Ptpn5P54830 541 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 CenplQ3U3S3 329 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Ccdc114Q3UX62 658 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Znf728Q6P5C7 752 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Taf1cQ6PDZ2 836 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Foxo6Q70KY4 559 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Tarsl2Q8BLY2 790 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Slc18a2Q8BRU6 517 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Dnali1Q8BVN8 258 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Gatad2aQ8CHY6 629 aaKnown RBP18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Agap3Q8VHH5 910 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Snx24Q9CRB0 169 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Nme3Q9WV85 169 aa18.65■□□□□ 0.58
Vti1b-201ENSMUST00000055262 Olfr1049A2ARZ0 308 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 Fam46dB1ATX6 390 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 Ppp1r36D3Z0R2 411 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 Gm42957D6RFQ2 366 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 Socs5O54928 536 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 Grk4O70291 574 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 P01807 119 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 Ptprn2P80560 1001 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 Cdk16Q04735 496 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 Pdss1Q33DR2 409 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 Tead4Q62296 427 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 Bcl2l1Q64373 233 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 Rbl2Q64700 1135 aa18.64■□□□□ 0.57
Vti1b-201ENSMUST00000055262 Ablim3Q69ZX8 682 aa18.64■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms