RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 LdlrP35951 862 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Smpdl3bP58242 456 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Serpina3gQ5I2A0 440 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Sdf4Q61112 361 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Gpr19Q61121 415 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Tas2r109Q7M707 316 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Olfr667Q7TRP4 326 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Ccdc186Q8C9S4 917 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Fnbp1lQ8K012 605 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Hacd3Q8K2C9 362 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Znf426Q8R1D1 550 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Bag2Q91YN9 210 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Spg21Q9CQC8 308 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Duoxa2Q9D311 320 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Cog8Q9JJA2 640 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 PodxlQ9R0M4 503 aa23.2■■□□□ 1.3
Cln6-201ENSMUST00000034776 Fam166bA2AIP0 273 aa23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 Trim55G3X8Y1 545 aa23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 Ldb2O55203 373 aa23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 Rab10P61027 200 aa23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 Abce1P61222 599 aaKnown RBP23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 Srbd1Q497V5 1015 aaKnown RBP23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 Gstt2Q61133 244 aa23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 Ston2Q8BZ60 895 aa23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 Fem1cQ8CEF1 617 aa23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 Slc22a19Q8VCA0 551 aa23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 Tbrg4Q91YM4 630 aaKnown RBP23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 NagaQ9QWR8 415 aa23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 HephQ9Z0Z4 1157 aa23.19■■□□□ 1.3
Cln6-201ENSMUST00000034776 Gm6370A0A0G2JGX9 315 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Gm21964A0A1W2P7S4 437 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Gm6309L7N481 315 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Cd160O88875 185 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 P01740 135 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 AcrP23578 436 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Cyp17a1P27786 507 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Gja8P28236 440 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Stx2Q00262 289 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Klhdc10Q6PAR0 439 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Dusp16Q6PCP3 660 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 TdrkhQ80VL1 560 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Plin5Q8BVZ1 463 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Trim68Q8K243 485 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Taf12Q8VE65 161 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Rsph1Q8VIG3 301 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Trim7Q923T7 510 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Rsrc1Q9DBU6 334 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 FscbA1EGX6 1074 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Trappc9Q3U0M1 1148 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Lrrc47Q505F5 581 aaKnown RBP23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Capn3Q64691 821 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Galnt10Q6P9S7 603 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Ccdc184Q8BMK5 191 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Stx18Q8VDS8 334 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 AjubaQ91XC0 547 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Creld1Q91XD7 420 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Spred2Q924S7 410 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Nme5Q99MH5 211 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Kctd4Q9D7X1 259 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Dpysl5Q9EQF6 564 aa23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Ruvbl2Q9WTM5 463 aaKnown RBP23.18■■□□□ 1.3
Cln6-201ENSMUST00000034776 Klhl41A2AUC9 606 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Cilp2D3Z7H8 1162 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Gm4450E9Q007 373 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Prl3b1P09586 222 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Tbc1d10aP58802 500 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Wdr5P61965 334 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Tmem207P86045 143 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Myadml2Q08AU7 307 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Hsd3b4Q61767 373 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Paqr9Q6TCG2 375 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Ints7Q7TQK1 966 aaKnown RBP23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Olfr213Q7TS32 327 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Smoc1Q8BLY1 463 aaKnown RBP23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Gpr21Q8BX79 349 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Wdr60Q8C761 999 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Vps39Q8R5L3 886 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Cadm1Q8R5M8 456 aaKnown RBP23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Ndufb5Q9CQH3 189 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Pih1d1Q9CQJ2 290 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Ttc9bQ9D6E4 239 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Trip4Q9QXN3 581 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Ern2Q9Z2E3 911 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Ccl26F8VQM2 93 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Slc9a3G3X939 829 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 EsrraO08580 422 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 KitP05532 979 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Mthfd2P18155 350 aaKnown RBP23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Nudt1P53368 156 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Atp5bP56480 529 aaKnown RBP23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Agap2Q3UHD9 1186 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Scn2bQ56A07 215 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Serpinb6Q60854 378 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Tigd3Q7TM95 470 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Stk38lQ7TSE6 464 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Ccdc50Q810U5 305 aaKnown RBP23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Nod1Q8BHB0 953 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Shc2Q8BMC3 573 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Lrif1Q8CDD9 755 aa23.17■■□□□ 1.3
Cln6-201ENSMUST00000034776 Zbtb44Q8R0A2 453 aa23.17■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms