RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Clic3Q9D7P7 237 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Borcs5Q9D920 195 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Nrip2Q9JHR9 270 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Cngb3Q9JJZ9 694 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Arrdc4A0A0B4J1F4 415 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 A0A1Y7VP24 259 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Skint1A7TZE6 364 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Prf1P10820 554 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 PrkcgP63318 697 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ldb1P70662 411 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 RalgdsQ03385 852 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Fscn2Q32M02 492 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Q32M26 199 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 MyrfQ3UR85 1138 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 KrtdapQ3V2T4 102 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Dyrk2Q5U4C9 599 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 DbhQ64237 622 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Podnl1Q6P3Y9 559 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Olfr1128Q7TR47 311 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Cops7bQ8BV13 264 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 OsgepQ8BWU5 335 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Exd1Q8CDF7 570 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gstm4Q8R5I6 218 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Zdhhc7Q91WU6 308 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Pdia5Q921X9 517 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Npffr2Q924H0 417 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Trhr2Q9ERT2 382 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gprc5dQ9JIL6 344 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Dcun1d1Q9QZ73 259 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gm3173A6NAS3 172 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gm3020E9Q3J7 150 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gm2897K7N6T7 172 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 En2P09066 324 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Echdc2Q3TLP5 296 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Pitpnm3Q3UHE1 974 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Adrbk2Q3UYH7 688 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Akap14Q3V0I7 536 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 UrgcpQ5NCI0 926 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Uimc1Q5U5Q9 727 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Naaladl1Q7M758 745 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gm3411Q8C7R2 150 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Spats2lQ91WJ7 558 aaKnown RBP15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Mtif2Q91YJ5 727 aaKnown RBP15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Lysmd3Q99LE3 305 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Oser1Q9D722 291 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 SgshQ9EQ08 502 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Shroom3Q9QXN0 1986 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Fbxo17Q9QZM8 286 aa15.16■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Wdr49A0A0N4SUK7 710 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Cyp4a12bA2A974 508 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 5830411N06RikB3F5L4 1112 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 2610028H24RikG5E8K1 270 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Sgo2bJ3QMK1 1167 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Rhox2gL7MUB9 191 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Man1a1P45700 655 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Fdft1P53798 416 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 AdslP54822 484 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Treml2Q2LA85 329 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Olfr1198Q7TR12 308 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Kirrel2Q7TSU7 700 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Gprc5aQ8BHL4 356 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Znf784Q8BI69 297 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ctxn3Q8BXZ0 80 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Exd2Q8VEG4 650 aaKnown RBP15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Olfr1494Q8VGP8 315 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Cyp4a12aQ91WL5 508 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Pcdhb4Q91XZ6 784 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Tma16Q9CR02 221 aaKnown RBP15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Hddc3Q9D114 179 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ap1m2Q9WVP1 423 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Nup205A0A0J9YUD5 2061 aaKnown RBP15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Igkv5-45A0A0B4J1J1 115 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Tnip3A0A1D5RMN0 279 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Coq10bQ3THF9 240 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Mapre1Q61166 268 aaKnown RBP15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 GpamQ61586 827 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Galnt10Q6P9S7 603 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ofcc1Q8BGX4 166 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Trerf1Q8BXJ2 1205 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 Ttc39cQ8VE09 580 aa15.15■□□□□ 0.02
Nkx3-1-201ENSMUST00000022646 1700001O22RikA2APZ1 375 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Aldoart1A6ZI46 419 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Znf518bB2RRE4 1077 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gm3739L7N296 216 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 En1P09065 401 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Ncf4P97369 339 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Mtf2Q02395 593 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Rabl6Q5U3K5 725 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Fzd6Q61089 709 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Dpy19l3Q71B07 716 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Parp9Q8CAS9 866 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Lin52Q8CD94 116 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 FcrlaQ920A9 352 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Smim11aQ99J19 55 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Psip1Q99JF8 528 aaKnown RBP15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Pmf1Q9CPV5 202 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Gemin2Q9CQQ4 269 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Vps28Q9D1C8 221 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Kif12Q9D2Z8 642 aa15.14■□□□□ 0.01
Nkx3-1-201ENSMUST00000022646 Dus2Q9D7B1 493 aa15.14■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms