RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SEMA5AQ13591 1074 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 KCNJ8Q15842 424 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 VPS72Q15906 364 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 SUPT20HL1Q3ZLR7 823 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 ATF7IP2Q5U623 682 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 MAP1SQ66K74 1059 aaPredicted RBP6.73□□□□□ -1.33
LMO3-235ENST00000616247 CRTC3Q6UUV7 619 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 KRT27Q7Z3Y8 459 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 DENND6AQ8IWF6 608 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 SIX5Q8N196 739 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 PCYOX1LQ8NBM8 494 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 PSD4Q8NDX1 1056 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 PSMA8Q8TAA3 256 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 ARNTL2Q8WYA1 636 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 HDAC10Q969S8 669 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 ACDQ96AP0 544 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 SLCO4A1Q96BD0 722 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 MS4A3Q96HJ5 214 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 LRCH3Q96II8 777 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 NAT9Q9BTE0 207 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 C9orf16Q9BUW7 83 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 ANKRD60Q9BZ19 345 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 TRIM15Q9C019 465 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 RPAP3Q9H6T3 665 aaPredicted RBP6.73□□□□□ -1.33
LMO3-235ENST00000616247 PRM3Q9NNZ6 103 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 VTI1BQ9UEU0 232 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 SLCO1B7G3V0H7 640 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 SYNCRIPO60506 623 aaKnown RBP6.73□□□□□ -1.33
LMO3-235ENST00000616247 IL7RP16871 459 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 MPP1Q00013 466 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 CLCQ05315 142 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 SF3B4Q15427 424 aaKnown RBP eCLIP6.73□□□□□ -1.33
LMO3-235ENST00000616247 TAZQ16635 292 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 FBXO48Q5FWF7 155 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 NHSL2Q5HYW2 709 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 SPANXN3Q5MJ09 141 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 STXBP5Q5T5C0 1151 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 PPP1R26Q5T8A7 1209 aaPredicted RBP6.73□□□□□ -1.33
LMO3-235ENST00000616247 SLCO6A1Q86UG4 719 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 VSIG10LQ86VR7 867 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 TMEM126BQ8IUX1 230 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 ZNF567Q8N184 647 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 CLIP4Q8N3C7 705 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 KCTD15Q96SI1 283 aaPredicted RBP6.73□□□□□ -1.33
LMO3-235ENST00000616247 NT5C1AQ9BXI3 368 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 SMARCAD1Q9H4L7 1026 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 ITM2CQ9NQX7 267 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 TBC1D13Q9NVG8 400 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 MORF4L1Q9UBU8 362 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 GNPTGQ9UJJ9 305 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 PNMA8BQ9ULN7 279 aaPredicted RBP6.73□□□□□ -1.33
LMO3-235ENST00000616247 ERGIC3Q9Y282 383 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 TAF1LQ8IZX4 1826 aa6.73□□□□□ -1.33
LMO3-235ENST00000616247 IQCA1LA6NCM1 817 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 LACTBL1A8MY62 500 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 CLDN25C9JDP6 229 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SDHDO14521 159 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 PEX10O60683 326 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 CLPXO76031 633 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 NADKO95544 446 aaPredicted RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 JCHAINP01591 159 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 IDO1P14902 403 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 STMN1P16949 149 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 NMBRP28336 390 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 TTKP33981 857 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 TRPC1P48995 793 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SULT1E1P49888 294 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 STAT5BP51692 787 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 PRKAA2P54646 552 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 BCAT1P54687 386 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 FPGSQ05932 587 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SURF1Q15526 300 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 PPP4R4Q6NUP7 873 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 CNSTQ6PJW8 725 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 ZYG11AQ6WRX3 759 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SFRP1Q8N474 314 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 C1orf127Q8N9H9 656 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 IPMKQ8NFU5 416 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SEPT8Q92599 483 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SGCDQ92629 289 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SDCCAG3Q96C92 435 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 GJD4Q96KN9 370 aaPredicted RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 NSMCE3Q96MG7 304 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 DACH2Q96NX9 599 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 MUS81Q96NY9 551 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 ZNF670Q9BS34 389 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SLC25A23Q9BV35 468 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 NACA2Q9H009 215 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 XYLT2Q9H1B5 865 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 HMG20AQ9NP66 347 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 SUCOQ9UBS9 1254 aaKnown RBP6.72□□□□□ -1.33
LMO3-235ENST00000616247 ZNHIT2Q9UHR6 403 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 ITGB1BP2Q9UKP3 347 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 RAD54BQ9Y620 910 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 DOT1LQ8TEK3 1739 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 LINC00854A0A1B0GVQ3 168 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 YDJCA8MPS7 323 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 PFDN6O15212 129 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 AQP9O43315 295 aa6.72□□□□□ -1.33
LMO3-235ENST00000616247 HCRTO43612 131 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms