RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 CHADLQ6NUI6 762 aa18.83■□□□□ 0.61
GABPB1-212ENST00000615671 FAM98AQ8NCA5 519 aaKnown RBP18.83■□□□□ 0.61
GABPB1-212ENST00000615671 HJURPQ8NCD3 748 aaPredicted RBP18.83■□□□□ 0.61
GABPB1-212ENST00000615671 LENG1Q96BZ8 264 aaPredicted RBP18.83■□□□□ 0.61
GABPB1-212ENST00000615671 MYLK2Q9H1R3 596 aa18.83■□□□□ 0.61
GABPB1-212ENST00000615671 SLC28A2O43868 658 aa18.83■□□□□ 0.61
GABPB1-212ENST00000615671 CBX2Q14781 532 aaPredicted RBP18.83■□□□□ 0.61
GABPB1-212ENST00000615671 FAM187BQ17R55 369 aa18.83■□□□□ 0.61
GABPB1-212ENST00000615671 OR14C36Q8NHC7 312 aa18.83■□□□□ 0.61
GABPB1-212ENST00000615671 KCTD4Q8WVF5 259 aa18.83■□□□□ 0.61
GABPB1-212ENST00000615671 TEKT5Q96M29 485 aa18.83■□□□□ 0.61
GABPB1-212ENST00000615671 NXF3Q9H4D5 531 aaKnown RBP18.83■□□□□ 0.61
GABPB1-212ENST00000615671 VAV3Q9UKW4 847 aa18.83■□□□□ 0.61
GABPB1-212ENST00000615671 PTPRNQ16849 979 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 MPPE1Q53F39 396 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 VPS35Q96QK1 796 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 DDX18Q9NVP1 670 aaKnown RBP18.83■□□□□ 0.6
GABPB1-212ENST00000615671 PROCP04070 461 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 PPP3CAQ08209 521 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 CTBP1Q13363 440 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 KPNB1Q14974 876 aaKnown RBP18.83■□□□□ 0.6
GABPB1-212ENST00000615671 HPS6Q86YV9 775 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 RAVER1Q8IY67 606 aaKnown RBP18.83■□□□□ 0.6
GABPB1-212ENST00000615671 PYDC1Q8WXC3 89 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 RORBQ92753 470 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 TP53INP1Q96A56 240 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 MCMBPQ9BTE3 642 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 WRAP53Q9BUR4 548 aaKnown RBP18.83■□□□□ 0.6
GABPB1-212ENST00000615671 AGO1Q9UL18 857 aaKnown RBP18.83■□□□□ 0.6
GABPB1-212ENST00000615671 TLR5O60602 858 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 MRPS22P82650 360 aaKnown RBP18.83■□□□□ 0.6
GABPB1-212ENST00000615671 CPSF6Q16630 551 aaKnown RBP eCLIP18.83■□□□□ 0.6
GABPB1-212ENST00000615671 SVOPQ8N4V2 548 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 MAGEE2Q8TD90 523 aaPredicted RBP18.83■□□□□ 0.6
GABPB1-212ENST00000615671 PIGKQ92643 395 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 LMLNQ96KR4 655 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 ACO2Q99798 780 aaKnown RBP18.83■□□□□ 0.6
GABPB1-212ENST00000615671 CDADC1Q9BWV3 514 aa18.83■□□□□ 0.6
GABPB1-212ENST00000615671 ITSN1Q15811 1721 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 PAPSS1O43252 624 aaPredicted RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 GNRH1P01148 92 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 EIF4BP23588 611 aaKnown RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 TRAF3Q13114 568 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 SEMA5AQ13591 1074 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 RNASE12Q5GAN4 147 aaKnown RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 FAM46CQ5VWP2 391 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 NOL6Q9H6R4 1146 aaKnown RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 PDP2Q9P2J9 529 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 IQCF5A8MTL0 148 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 BCL10O95999 233 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 APODP05090 189 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 ITPKAP23677 461 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 CXCR2P25025 360 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 SPIBQ01892 262 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 SF1Q15637 639 aaKnown RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 BRINP2Q9C0B6 783 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 ACSS2Q9NR19 701 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 ATAD3AQ9NVI7 634 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 KHDRBS3O75525 346 aaKnown RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 BPIFB6Q8NFQ5 453 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 STAG3L4Q8TBR4 150 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 SLC27A6Q9Y2P4 619 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 E9PCH4 1651 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 RPL9P32969 192 aaKnown RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 ZNF75CPQ92670 426 aaPredicted RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 C18orf25Q96B23 403 aaPredicted RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 CNPPD1Q9BV87 410 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 RXFP1Q9HBX9 757 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 URADA6NGE7 173 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 RBMXL2O75526 392 aaKnown RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 ITGA3P26006 1051 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 STXBP1P61764 594 aaKnown RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 MAMLD1Q13495 774 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 ZDHHC13Q8IUH4 622 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 CLVS1Q8IUQ0 354 aaPredicted RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 LINGO1Q96FE5 620 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 KAZALD1Q96I82 304 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 FTHL17Q9BXU8 183 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 CLEC4MQ9H2X3 399 aaPredicted RBP18.82■□□□□ 0.6
GABPB1-212ENST00000615671 EFR3BQ9Y2G0 817 aa18.82■□□□□ 0.6
GABPB1-212ENST00000615671 SLC15A5A6NIM6 579 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 LSM3P62310 102 aaKnown RBP18.81■□□□□ 0.6
GABPB1-212ENST00000615671 GCNT1Q02742 428 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 KIAA0408Q6ZU52 694 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 OFCC1Q8IZS5 231 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 CPA6Q8N4T0 437 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 RTL3Q8N8U3 475 aaKnown RBP18.81■□□□□ 0.6
GABPB1-212ENST00000615671 CLHC1Q8NHS4 586 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 VANGL1Q8TAA9 524 aaPredicted RBP18.81■□□□□ 0.6
GABPB1-212ENST00000615671 VPS4AQ9UN37 437 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 NPEPPSL1A6NEC2 478 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 AVILO75366 819 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 RPL14P50914 215 aaKnown RBP18.81■□□□□ 0.6
GABPB1-212ENST00000615671 FRG1Q14331 258 aaKnown RBP18.81■□□□□ 0.6
GABPB1-212ENST00000615671 SUZ12Q15022 739 aaKnown RBP18.81■□□□□ 0.6
GABPB1-212ENST00000615671 IQCF2Q8IXL9 164 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 MPP4Q96JB8 637 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 LGMNQ99538 433 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 IL22Q9GZX6 179 aa18.81■□□□□ 0.6
GABPB1-212ENST00000615671 YDJCA8MPS7 323 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms