RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 CXorf49A8MYA2 514 aaPredicted RBP14.41□□□□□ -0.1
USP39-220ENST00000613444 USP1O94782 785 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 STX2P32856 288 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 ECT2LQ008S8 904 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 GRM2Q14416 872 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 POU6F1Q14863 301 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 RALGPS1Q5JS13 557 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 AGBL2Q5U5Z8 902 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 MBLAC2Q68D91 279 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 KCTD16Q68DU8 428 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 CROCCP2Q86T23 111 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 METTL3Q86U44 580 aaKnown RBP14.41□□□□□ -0.1
USP39-220ENST00000613444 GOLGA6L1Q8N7Z2 621 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 TLCD1Q96CP7 247 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 CHFRQ96EP1 664 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 MFSD3Q96ES6 412 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 PKNOX2Q96KN3 472 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 TM6SF2Q9BZW4 377 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 SAMD15Q9P1V8 674 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 LGALS13Q9UHV8 139 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 USP15Q9Y4E8 981 aaPredicted RBP14.41□□□□□ -0.1
USP39-220ENST00000613444 RPS6KL1Q9Y6S9 549 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 FAM159BA6NKW6 160 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 CDH16O75309 829 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 ECI2O75521 394 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 POLBP06746 335 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 IVLP07476 585 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 PSMC3P17980 439 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 SLC6A11P48066 632 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 CSNK1DP48730 415 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 DGKGP49619 791 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 SULT2A1Q06520 285 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 TRAF2Q12933 501 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 RASA2Q15283 850 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 KLHL38Q2WGJ6 581 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 ANKRD20A4Q4UJ75 823 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 PCID2Q5JVF3 399 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 SRLQ86TD4 932 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 CYP4X1Q8N118 509 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 MICALL1Q8N3F8 863 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 ISG20Q96AZ6 181 aaKnown RBP14.4□□□□□ -0.1
USP39-220ENST00000613444 MRGPRX3Q96LB0 322 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 NECTIN4Q96NY8 510 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 CYTH2Q99418 400 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 CENPHQ9H3R5 247 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 VPS18Q9P253 973 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 EPS15L1Q9UBC2 864 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 PRKAG3Q9UGI9 489 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 SLC24A2Q9UI40 661 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 SLCO3A1Q9UIG8 710 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 PCDHGC4Q9Y5F7 938 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 FAM169AQ9Y6X4 670 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 POC1B-GALNT4F8VUJ3 575 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 ARNTLO00327 626 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 FZD6O60353 706 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 NDST3O95803 873 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 PDHA1P08559 390 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 HLA-DPA1P20036 260 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 NMBRP28336 390 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 FRG1Q14331 258 aaKnown RBP14.4□□□□□ -0.1
USP39-220ENST00000613444 SPANXN3Q5MJ09 141 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 PKN3Q6P5Z2 889 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 PHTF2Q8N3S3 785 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 MYO19Q96H55 970 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 RANBP9Q96S59 729 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 PPCSQ9HAB8 311 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 MRM3Q9HC36 420 aaKnown RBP14.4□□□□□ -0.1
USP39-220ENST00000613444 CD207Q9UJ71 328 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 CHKBQ9Y259 395 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 TCAF1Q9Y4C2 921 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 ARIH1Q9Y4X5 557 aaPredicted RBP14.4□□□□□ -0.1
USP39-220ENST00000613444 RAI2Q9Y5P3 530 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 TICRRQ7Z2Z1 1910 aa14.4□□□□□ -0.1
USP39-220ENST00000613444 HMGB1P1B2RPK0 211 aaPredicted RBP14.39□□□□□ -0.11
USP39-220ENST00000613444 H3BQ06 376 aaPredicted RBP14.39□□□□□ -0.11
USP39-220ENST00000613444 FGF1P05230 155 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 AP1S1P61966 158 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 RUNX3Q13761 415 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 GALNT3Q14435 633 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 ARMC3Q5W041 872 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 C22orf39Q6P5X5 142 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 ADGRD1Q6QNK2 874 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 PTCD2Q8WV60 388 aaKnown RBP14.39□□□□□ -0.11
USP39-220ENST00000613444 DCAKDQ8WVC6 231 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 SLC44A1Q8WWI5 657 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 SORCS1Q8WY21 1168 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 ZNF669Q96BR6 464 aaPredicted RBP14.39□□□□□ -0.11
USP39-220ENST00000613444 IFT43Q96FT9 208 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 PAFAH2Q99487 392 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 CEP44Q9C0F1 390 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 TNKS2Q9H2K2 1166 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 GTSE1Q9NYZ3 720 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 SLC25A13Q9UJS0 675 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 ERVW-1Q9UQF0 538 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 GRXCR2A6NFK2 248 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 ANHXE9PGG2 379 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 RGS16O15492 202 aaPredicted RBP14.39□□□□□ -0.11
USP39-220ENST00000613444 BMP1P13497 986 aa14.39□□□□□ -0.11
USP39-220ENST00000613444 POLR2EP19388 210 aaKnown RBP14.39□□□□□ -0.11
USP39-220ENST00000613444 ADRA1DP25100 572 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms