RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 DDX3XO00571 662 aaKnown RBP eCLIP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 MAP2K7O14733 419 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 BNC1Q01954 994 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 DEF8Q6ZN54 512 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 SLC39A8Q9C0K1 460 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 CKLFQ9UBR5 152 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 A0A0X1KG70 313 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ULK1O75385 1050 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ERN1O75460 977 aaKnown RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 TLX1P31314 330 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ALG11Q2TAA5 492 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 BRSK2Q8IWQ3 736 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 MREGQ8N565 214 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ALLCQ8N6M5 410 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 FNDC11Q9BVV2 318 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 RHOBTB2Q9BYZ6 727 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ST3GAL5Q9UNP4 418 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 NCANO14594 1321 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 SALL1Q9NSC2 1324 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 RAB2AP61019 212 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ELAVL2Q12926 359 aaKnown RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 TBX2Q13207 712 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 PPIL2Q13356 520 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ZNF554Q86TJ5 538 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ALYREFQ86V81 257 aaKnown RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 MCFD2Q8NI22 146 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 FUCA2Q9BTY2 467 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ELOVL4Q9GZR5 314 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 MORF4L1Q9UBU8 362 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ARHGEF28Q8N1W1 1705 aaKnown RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 SUV39H1O43463 412 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 OR10H3O60404 316 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 CST1P01037 141 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 SLC6A2P23975 617 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 AP1S2P56377 157 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 GRIN3AQ8TCU5 1115 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 CITED4Q96RK1 184 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 MROH8Q9H579 483 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 POPDC2Q9HBU9 364 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 TMEM51Q9NW97 253 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 RTTNQ86VV8 2226 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 PREX1Q8TCU6 1659 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 SRRM3A6NNA2 597 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 H3BNX3 289 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 MDM4O15151 490 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 DRD4P21917 467 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 DNAJB2P25686 324 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 TMEM119Q4V9L6 283 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 C4orf19Q8IY42 314 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 TNS4Q8IZW8 715 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 NKAPQ8N5F7 415 aaKnown RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 GPR156Q8NFN8 814 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ACMSDQ8TDX5 336 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 HTRA1Q92743 480 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 HAVCR1Q96D42 359 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 POLR1EQ9GZS1 481 aaKnown RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 PRDM16Q9HAZ2 1276 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 NEK6Q9HC98 313 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 AP4B1Q9Y6B7 739 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 SQORQ9Y6N5 450 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 PIK3C2BO00750 1634 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 DEPDC5O75140 1603 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 TRIM38O00635 465 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 LRIG2O94898 1065 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 RPS12P25398 132 aaKnown RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ARHGDIBP52566 201 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 XIAPP98170 497 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 GPAT3Q53EU6 434 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 DGCR14Q96DF8 476 aaKnown RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 TRNAU1APQ9NX07 287 aaKnown RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 PCDHB5Q9Y5E4 795 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 MYO7AQ13402 2215 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 KLRK1P26718 216 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 RPL9P32969 192 aaKnown RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 BUD31P41223 144 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-217ENST00000602723 TAS2R41P59536 307 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 PPP4CP60510 307 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 AMPD2Q01433 879 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 TOMM20Q15388 145 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 SAMD3Q8N6K7 520 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 SCAIQ8N9R8 606 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ACER1Q8TDN7 264 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 CHST7Q9NS84 486 aa9.67□□□□□ -0.86
CSMD1-217ENST00000602723 ANKDD1BA6NHY2 528 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 NFKB1P19838 968 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 ATP5F1P24539 256 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 RAB27AP51159 221 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 BST1Q10588 318 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 TYSND1Q2T9J0 566 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 STYK1Q6J9G0 422 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 ELMO3Q96BJ8 720 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 PCDH12Q9NPG4 1184 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 ZNF446Q9NWS9 450 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 SMPD4Q9NXE4 827 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 MARCH2Q9P0N8 246 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 SERPINA4P29622 427 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 FCGRTP55899 365 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 GRIK4Q16099 956 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 MEA1Q16626 185 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 SLC5A9Q2M3M2 681 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms