RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 RFX8Q6ZV50 586 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 TSEN2Q8NCE0 465 aaKnown RBP17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 CCDC86Q9H6F5 360 aaKnown RBP17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 PARVAQ9NVD7 372 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 CWC15Q9P013 229 aaKnown RBP17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 HPCAL4Q9UM19 191 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 ANKRD62A6NC57 917 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 EEF2KO00418 725 aaKnown RBP17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 YKT6O15498 198 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 SERPINC1P01008 464 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 PFN3P60673 137 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 INSM1Q01101 510 aaPredicted RBP17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 TARDBPQ13148 414 aaKnown RBP eCLIP17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 DPYSQ14117 519 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 PARP15Q460N3 678 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 PPP6R3Q5H9R7 873 aaPredicted RBP17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 FAM182AQ5T1J6 154 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 CAMK1DQ8IU85 385 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 TP53I13Q8NBR0 393 aaPredicted RBP17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 OR4C6Q8NH72 309 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 CENPTQ96BT3 561 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 VCPIP1Q96JH7 1222 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 FEM1CQ96JP0 617 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 THAP2Q9H0W7 228 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 UBA2Q9UBT2 640 aaPredicted RBP17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 GPSM3Q9Y4H4 160 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 ASXL3Q9C0F0 2248 aa17.04■□□□□ 0.32
CROCCP3-203ENST00000589964 COL27A1Q8IZC6 1860 aaPredicted RBP17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 URB1O60287 2271 aaKnown RBP17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 A0A087X0T9 212 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 NEMP1O14524 444 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 GCATO75600 419 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 IGSF6O95976 241 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 FAM228BP0C875 321 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 CKMT2P17540 419 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 YBEYP58557 167 aaPredicted RBP17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 PDE1CQ14123 709 aaPredicted RBP17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 IRF4Q15306 451 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 TTC7BQ86TV6 843 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 PELI3Q8N2H9 469 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 OXR1Q8N573 874 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 ZNF548Q8NEK5 533 aaPredicted RBP17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 CPLX3Q8WVH0 158 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 ISCUQ9H1K1 167 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 PCDH12Q9NPG4 1184 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 PCDHGA1Q9Y5H4 931 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 LOC400499M0QZD8 3231 aa17.03■□□□□ 0.32
CROCCP3-203ENST00000589964 SPTY2D1-AS1A0A0U1RR47 76 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 CXorf51AA0A1B0GTR3 108 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 K7ESM1 405 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 DFFAO00273 331 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 FGF10O15520 208 aaPredicted RBP17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 TSPAN6O43657 245 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 PEX11BO96011 259 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 GYPCP04921 128 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 GZMAP12544 262 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 GM2AP17900 193 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 AMPD1P23109 780 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 GEMIN4P57678 1058 aaKnown RBP17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 ZNF211Q13398 564 aaPredicted RBP17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 C1orf61Q13536 156 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 KLHL40Q2TBA0 621 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 WSCD2Q2TBF2 565 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 FILIP1LQ4L180 1135 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 INO80DQ53TQ3 878 aaPredicted RBP17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 ERMARDQ5T6L9 678 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 PGBD5Q8N414 524 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 SMIM14Q96QK8 99 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 RETREG1Q9H6L5 497 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 CATSPERBQ9H7T0 1116 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 NENFQ9UMX5 172 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 PCDHB1Q9Y5F3 818 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 HS3ST3A1Q9Y663 406 aa17.02■□□□□ 0.32
CROCCP3-203ENST00000589964 A0A0U1RQS6 177 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 TSPAN11A1L157 253 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 PMS2P1A4D2B8 440 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 ZSCAN5CA6NGD5 496 aaPredicted RBP17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 TLX3O43711 291 aaPredicted RBP17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 CSF2P04141 144 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 CD48P09326 243 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 CCDC172P0C7W6 258 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 NME1P15531 152 aaKnown RBP17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 ACP1P24666 158 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 NDST2P52849 883 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 RALGDSQ12967 914 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 MMRN1Q13201 1228 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 COL28A1Q2UY09 1125 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 DEFB133Q30KQ1 61 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 TDRD12Q587J7 1177 aaKnown RBP17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 GALNT15Q8N3T1 639 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 LRRN4Q8WUT4 740 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 HNRNPLLQ8WVV9 542 aaKnown RBP17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 HSPH1Q92598 858 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 LRIG1Q96JA1 1093 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 APOLD1Q96LR9 279 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 LENG8Q96PV6 779 aaPredicted RBP17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 OSBPL1AQ9BXW6 950 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 CLPBQ9H078 707 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 ZWILCHQ9H900 591 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 IFNKQ9P0W0 207 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms