RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SLC2A6Q9UGQ3 507 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 MIA3Q5JRA6 1907 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 GALNT3Q14435 633 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 ZNF77Q15935 545 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 TMC5Q6UXY8 1006 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 TIFABQ6ZNK6 161 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 ARID3BQ8IVW6 561 aaPredicted RBP20.04■□□□□ 0.8
TRIM47-204ENST00000587339 C12orf76Q8N812 135 aaPredicted RBP20.04■□□□□ 0.8
TRIM47-204ENST00000587339 CKAP2Q8WWK9 683 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 ABHD8Q96I13 439 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 ZNF317Q96PQ6 595 aaPredicted RBP20.04■□□□□ 0.8
TRIM47-204ENST00000587339 NSMCE4AQ9NXX6 385 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 TBC1D14Q9P2M4 693 aa20.04■□□□□ 0.8
TRIM47-204ENST00000587339 NOTCH4Q99466 2003 aa20.03■□□□□ 0.8
TRIM47-204ENST00000587339 CCDC85CA6NKD9 419 aa20.03■□□□□ 0.8
TRIM47-204ENST00000587339 COPEO14579 308 aa20.03■□□□□ 0.8
TRIM47-204ENST00000587339 NDST3O95803 873 aa20.03■□□□□ 0.8
TRIM47-204ENST00000587339 CD70P32970 193 aa20.03■□□□□ 0.8
TRIM47-204ENST00000587339 RHOAP61586 193 aa20.03■□□□□ 0.8
TRIM47-204ENST00000587339 PDE1BQ01064 536 aa20.03■□□□□ 0.8
TRIM47-204ENST00000587339 NSUN2Q08J23 767 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRIM47-204ENST00000587339 RAB30Q15771 203 aa20.03■□□□□ 0.8
TRIM47-204ENST00000587339 TMEM25Q86YD3 366 aa20.03■□□□□ 0.8
TRIM47-204ENST00000587339 TRIB3Q96RU7 358 aa20.03■□□□□ 0.8
TRIM47-204ENST00000587339 RBBP8Q99708 897 aa20.03■□□□□ 0.8
TRIM47-204ENST00000587339 FCF1Q9Y324 198 aaKnown RBP20.03■□□□□ 0.8
TRIM47-204ENST00000587339 ARIH1Q9Y4X5 557 aaPredicted RBP20.03■□□□□ 0.8
TRIM47-204ENST00000587339 MT-CO1P00395 513 aa20.02■□□□□ 0.8
TRIM47-204ENST00000587339 SPRP35270 261 aaPredicted RBP20.02■□□□□ 0.8
TRIM47-204ENST00000587339 ARCN1P48444 511 aaKnown RBP20.02■□□□□ 0.8
TRIM47-204ENST00000587339 PLEKHG6Q3KR16 790 aa20.02■□□□□ 0.8
TRIM47-204ENST00000587339 TSTD2Q5T7W7 516 aa20.02■□□□□ 0.8
TRIM47-204ENST00000587339 HHATQ5VTY9 493 aa20.02■□□□□ 0.8
TRIM47-204ENST00000587339 KIAA0930Q6ICG6 404 aaPredicted RBP20.02■□□□□ 0.8
TRIM47-204ENST00000587339 LVRNQ6Q4G3 990 aa20.02■□□□□ 0.8
TRIM47-204ENST00000587339 ITFG1Q8TB96 612 aa20.02■□□□□ 0.8
TRIM47-204ENST00000587339 NSMCE3Q96MG7 304 aa20.02■□□□□ 0.8
TRIM47-204ENST00000587339 TDRD1Q9BXT4 1180 aaKnown RBP20.02■□□□□ 0.8
TRIM47-204ENST00000587339 IQCGQ9H095 443 aaKnown RBP20.02■□□□□ 0.8
TRIM47-204ENST00000587339 LHX3Q9UBR4 397 aa20.02■□□□□ 0.8
TRIM47-204ENST00000587339 CHKBQ9Y259 395 aa20.02■□□□□ 0.8
TRIM47-204ENST00000587339 CEP290O15078 2479 aa20.02■□□□□ 0.8
TRIM47-204ENST00000587339 PAPSS2O95340 614 aaPredicted RBP20.02■□□□□ 0.79
TRIM47-204ENST00000587339 ARNTP27540 789 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 LIMK2P53671 638 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 USP4Q13107 963 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 SLC12A1Q13621 1099 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 ZSCAN26Q16670 478 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 NLRP9Q7RTR0 991 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 CPLX4Q7Z7G2 160 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 BLOC1S5Q8TDH9 187 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 IRF7Q92985 503 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 MAGEB18Q96M61 343 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 BBS2Q9BXC9 721 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 SFXN1Q9H9B4 322 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 ABCB8Q9NUT2 735 aa20.02■□□□□ 0.79
TRIM47-204ENST00000587339 TRANK1O15050 2925 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 MROH6A6NGR9 719 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 NEDD8-MDP1E9PL57 170 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 ALDOAP04075 364 aaKnown RBP20.01■□□□□ 0.79
TRIM47-204ENST00000587339 VIMP08670 466 aaKnown RBP20.01■□□□□ 0.79
TRIM47-204ENST00000587339 ALADP13716 330 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 TCF3P15923 654 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 CCNFP41002 786 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 NEK3P51956 506 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 CSE1LP55060 971 aaKnown RBP20.01■□□□□ 0.79
TRIM47-204ENST00000587339 LAMB3Q13751 1172 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 THOC5Q13769 683 aaKnown RBP20.01■□□□□ 0.79
TRIM47-204ENST00000587339 NDUFAF2Q8N183 169 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 ZNF473Q8WTR7 871 aaKnown RBP20.01■□□□□ 0.79
TRIM47-204ENST00000587339 ATP2A3Q93084 1043 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 RMDN1Q96DB5 314 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 ATXN7L3BQ96GX2 97 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 SRPK1Q96SB4 655 aaKnown RBP20.01■□□□□ 0.79
TRIM47-204ENST00000587339 SLC13A1Q9BZW2 595 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 LINC00597Q9H2U6 94 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 SPHK2Q9NRA0 654 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 PCMTD2Q9NV79 361 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 SLC17A7Q9P2U7 560 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 PCDHGC4Q9Y5F7 938 aa20.01■□□□□ 0.79
TRIM47-204ENST00000587339 MYLKQ15746 1914 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 K7ERQ8 282 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 PENKP01210 267 aaPredicted RBP20■□□□□ 0.79
TRIM47-204ENST00000587339 HLA-FP30511 346 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 CCT5P48643 541 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 PLK1P53350 603 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 DMTNQ08495 405 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 FSTL4Q6MZW2 842 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 CNTN4Q8IWV2 1026 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 BRSK1Q8TDC3 778 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 ACMSDQ8TDX5 336 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 PTPRN2Q92932 1015 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 OTUB2Q96DC9 234 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 GDF15Q99988 308 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 C12orf65Q9H3J6 166 aaKnown RBP20■□□□□ 0.79
TRIM47-204ENST00000587339 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20■□□□□ 0.79
TRIM47-204ENST00000587339 INTS6Q9UL03 887 aaKnown RBP20■□□□□ 0.79
TRIM47-204ENST00000587339 RAI2Q9Y5P3 530 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 TCP11X1B4DZS4 312 aa20■□□□□ 0.79
TRIM47-204ENST00000587339 TPP1O14773 563 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms