RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 CLEC14AQ86T13 490 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 PARGQ86W56 976 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 ANKMY2Q8IV38 441 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 DEFB106AQ8N104 65 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 ATP11CQ8NB49 1132 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 CHST14Q8NCH0 376 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 ZNF548Q8NEK5 533 aaPredicted RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 WDR36Q8NI36 951 aaKnown RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 WDR48Q8TAF3 677 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 BTN2A2Q8WVV5 523 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 ZNF606Q8WXB4 792 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 SNX21Q969T3 373 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 CCDC114Q96M63 670 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 LENG8Q96PV6 779 aaPredicted RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 KLF6Q99612 283 aaPredicted RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 IL12RB2Q99665 862 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 TSG101Q99816 390 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 SRRTQ9BXP5 876 aaKnown RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 HDAC8Q9BY41 377 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 GPR27Q9NS67 375 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 DDIT4Q9NX09 232 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 IPO11Q9UI26 975 aaKnown RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 VANGL2Q9ULK5 521 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 CNTN6Q9UQ52 1028 aa5.44□□□□□ -1.54
VAPA-207ENST00000583879 HEMK1Q9Y5R4 338 aaPredicted RBP5.44□□□□□ -1.54
VAPA-207ENST00000583879 PLXNA2O75051 1894 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 MGAQ8IWI9 3026 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 ATMQ13315 3056 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 SYNJ2BP-COX16A0A087WUM0 186 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 CCDC187A0A096LP49 1063 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 A0A1W2PQ27 194 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 A0A1W2PQ64 194 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 PMS2P1A4D2B8 440 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 FPGTO14772 594 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 CASC3O15234 703 aaKnown RBP5.43□□□□□ -1.54
VAPA-207ENST00000583879 RAD51BO15315 384 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 YY2O15391 372 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 P4HA2O15460 535 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 SUV39H1O43463 412 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 MED7O43513 233 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 NOBOXO60393 691 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 SNAP91O60641 907 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 ZNF821O75541 412 aaPredicted RBP5.43□□□□□ -1.54
VAPA-207ENST00000583879 GCATO75600 419 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 LEFTY1O75610 366 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 CNTN5O94779 1100 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 ENDOD1O94919 500 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 HSP90AA1P07900 732 aaKnown RBP5.43□□□□□ -1.54
VAPA-207ENST00000583879 GLI1P08151 1106 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 ITGA2BP08514 1039 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 SFTPCP11686 197 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 ADRB3P13945 408 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 NID1P14543 1247 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 ITGB6P18564 788 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 RRM1P23921 792 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 RABIFP47224 123 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 IRAK1P51617 712 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 NEK3P51956 506 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 ADKP55263 362 aaKnown RBP5.43□□□□□ -1.54
VAPA-207ENST00000583879 PFN3P60673 137 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 KRT85P78386 507 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 GCNT1Q02742 428 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 LRRC63Q05C16 580 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 EIF2B5Q13144 721 aaKnown RBP5.43□□□□□ -1.54
VAPA-207ENST00000583879 SGCGQ13326 291 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 MEA1Q16626 185 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 CRTC2Q53ET0 693 aaPredicted RBP5.43□□□□□ -1.54
VAPA-207ENST00000583879 EFHC1Q5JVL4 640 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 COLEC12Q5KU26 742 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 PERM1Q5SV97 790 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 ZNF658Q5TYW1 1059 aaPredicted RBP5.43□□□□□ -1.54
VAPA-207ENST00000583879 KIAA1161Q6NSJ0 714 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 CRTC1Q6UUV9 634 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 ATG14Q6ZNE5 492 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 DPY19L3Q6ZPD9 716 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 C8orf86Q6ZUL3 223 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 PTAR1Q7Z6K3 402 aaPredicted RBP5.43□□□□□ -1.54
VAPA-207ENST00000583879 C14orf80Q86SX3 495 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 SETD3Q86TU7 594 aaPredicted RBP5.43□□□□□ -1.54
VAPA-207ENST00000583879 ARHGEF19Q8IW93 802 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 WDTC1Q8N5D0 677 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 TSEN2Q8NCE0 465 aaKnown RBP5.43□□□□□ -1.54
VAPA-207ENST00000583879 LMX1AQ8TE12 382 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 ASB12Q8WXK4 309 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 NAT6Q93015 286 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 SGF29Q96ES7 293 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 CCDC34Q96HJ3 373 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 SGSM3Q96HU1 749 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 PPP1R16AQ96I34 528 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 GSDMAQ96QA5 445 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 SLC2A13Q96QE2 648 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 PSMB7Q99436 277 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 SEMA3CQ99985 751 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 ANP32EQ9BTT0 268 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 C2orf49Q9BVC5 232 aaPredicted RBP5.43□□□□□ -1.54
VAPA-207ENST00000583879 BOCQ9BWV1 1114 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 SIK2Q9H0K1 926 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 MUC3BQ9H195 1237 aa5.43□□□□□ -1.54
VAPA-207ENST00000583879 TSPAN10Q9H1Z9 355 aaPredicted RBP5.43□□□□□ -1.54
VAPA-207ENST00000583879 WDCPQ9H6R7 721 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms