RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782		J3KR12	359 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	HYAL3	O43820	417 aa	Predicted RBP	10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	RARA	P10276	462 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	KRT10	P13645	584 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	GK	P32189	559 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	GJC1	P36383	396 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	CSNK1D	P48730	415 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	SCNN1B	P51168	640 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	THOP1	P52888	689 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	FAM193A	P78312	1265 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	NSUN2	Q08J23	767 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	PDK2	Q15119	407 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	CYTH1	Q15438	398 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	SEL1L3	Q68CR1	1132 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782		Q6ZSR6	202 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	POLN	Q7Z5Q5	900 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	SRL	Q86TD4	932 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	GATAD2A	Q86YP4	633 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	VSTM4	Q8IW00	320 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	NDUFAF2	Q8N183	169 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	CHCHD4	Q8N4Q1	142 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	ATPAF2	Q8N5M1	289 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	EID2	Q8N6I1	236 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	ARFGAP1	Q8N6T3	406 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	ASB12	Q8WXK4	309 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	ADAMTS14	Q8WXS8	1223 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	IFT43	Q96FT9	208 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	CNDP2	Q96KP4	475 aa	Known RBP	10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	LENG8	Q96PV6	779 aa	Predicted RBP	10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	DNAJC7	Q99615	494 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	KLC2	Q9H0B6	622 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	FZD3	Q9NPG1	666 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	ABHD10	Q9NUJ1	306 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	KLHL11	Q9NVR0	708 aa		10.49	□□□□□ -0.73
UBR1-207	ENST00000568782	TMEM8B	A6NDV4	472 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	TOR1B	O14657	336 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	ENC1	O14682	589 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	WNT9A	O14904	365 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	LZTS3	O60299	673 aa	Predicted RBP	10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	CBFA2T3	O75081	653 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	C1S	P09871	688 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	TMEM253	P0C7T8	217 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	AMPD1	P23109	780 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	EPHA8	P29322	1005 aa	Predicted RBP	10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	HNF1B	P35680	557 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	ARHGAP25	P42331	645 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	ADK	P55263	362 aa	Known RBP	10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	AP1S1	P61966	158 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	HNRNPK	P61978	463 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	DPYS	Q14117	519 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	LBR	Q14739	615 aa	Known RBP	10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	ST3GAL2	Q16842	350 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	UGP2	Q16851	508 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	TMEM259	Q4ZIN3	620 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	MARC1	Q5VT66	337 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	TIGD7	Q6NT04	549 aa	Predicted RBP	10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	RHOT2	Q8IXI1	618 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	PNPLA1	Q8N8W4	532 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	TMEM145	Q8NBT3	493 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	TSEN2	Q8NCE0	465 aa	Known RBP	10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	DENND6B	Q8NEG7	585 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	ATL2	Q8NHH9	583 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	SAP25	Q8TEE9	199 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	BTN2A2	Q8WVV5	523 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	BTBD6	Q96KE9	485 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	ZNF830	Q96NB3	372 aa	Predicted RBP	10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	CSPG4P5	Q96PW8	444 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	C1QTNF2	Q9BXJ5	285 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	MAK16	Q9BXY0	300 aa	Known RBP	10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	PDF	Q9HBH1	243 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	DNAJC28	Q9NX36	388 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	LHX3	Q9UBR4	397 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	ZFR2	Q9UPR6	939 aa	Known RBP	10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	MSRB2	Q9Y3D2	182 aa		10.48	□□□□□ -0.73
UBR1-207	ENST00000568782	COL5A1	P20908	1838 aa	Predicted RBP	10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	PTPRB	P23467	1997 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	TMEM110-MUSTN1	A8MSY1	372 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	C10orf142	B7Z368	130 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	MMP20	O60882	483 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	PROSC	O94903	275 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	IPO7	O95373	1038 aa	Known RBP	10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	PIGN	O95427	931 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	SPINK2	P20155	84 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	IL1R2	P27930	398 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	HTR1B	P28222	390 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	CLDN2	P57739	230 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	YPEL5	P62699	121 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	DAB2	P98082	770 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	ITK	Q08881	620 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	BNIP3	Q12983	259 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	PDE1C	Q14123	709 aa	Predicted RBP	10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	MESD	Q14696	234 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	UNQ6494/PRO21346	Q6UXR6	183 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	KYAT3	Q6YP21	454 aa	Known RBP	10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	ABI3BP	Q7Z7G0	1075 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	PARG	Q86W56	976 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	NETO2	Q8NC67	525 aa		10.47	□□□□□ -0.73
UBR1-207	ENST00000568782	OR13H1	Q8NG92	308 aa		10.47	□□□□□ -0.73

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