RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 ITM2BQ9Y287 266 aa25.49■■□□□ 1.67
FANCA-228ENST00000567943 LRRK1Q38SD2 2015 aa25.49■■□□□ 1.67
FANCA-228ENST00000567943 COL5A1P20908 1838 aaPredicted RBP25.49■■□□□ 1.67
FANCA-228ENST00000567943 TDRD6O60522 2096 aaKnown RBP25.48■■□□□ 1.67
FANCA-228ENST00000567943 PLXNB3Q9ULL4 1909 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 CD48P09326 243 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 MAN1A1P33908 653 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 OVGP1Q12889 678 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 MMRN1Q13201 1228 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 SLC45A4Q5BKX6 768 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 KANSL1Q7Z3B3 1105 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 CHCHD4Q8N4Q1 142 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 FAM71BQ8TC56 605 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 RFFLQ8WZ73 363 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 OSBPL1AQ9BXW6 950 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 CAAP1Q9H8G2 361 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 KLHL11Q9NVR0 708 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 RCOR3Q9P2K3 495 aaPredicted RBP25.48■■□□□ 1.67
FANCA-228ENST00000567943 INTUQ9ULD6 942 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 IGF2RP11717 2491 aa25.48■■□□□ 1.67
FANCA-228ENST00000567943 ZZEF1O43149 2961 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 AREL1O15033 823 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 RAD51BO15315 384 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 DKK1O94907 266 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 ATXN1LP0C7T5 689 aaKnown RBP25.47■■□□□ 1.67
FANCA-228ENST00000567943 HNRNPA2B1P22626 353 aaKnown RBP25.47■■□□□ 1.67
FANCA-228ENST00000567943 IL4RP24394 825 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 GRK6P43250 576 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 RXRGP48443 463 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 ARSEP51690 589 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 CLDN2P57739 230 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 RAD51Q06609 339 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 IL10RBQ08334 325 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 BNIP3Q12983 259 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 LRRC73Q5JTD7 316 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 GDPD4Q6W3E5 623 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 GCNT7Q6ZNI0 430 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 CALN1Q9BXU9 219 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 SLC17A9Q9BYT1 436 aa25.47■■□□□ 1.67
FANCA-228ENST00000567943 IPO11Q9UI26 975 aaKnown RBP25.47■■□□□ 1.67
FANCA-228ENST00000567943 DMXL2Q8TDJ6 3036 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 PALMO75781 387 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 MTA2O94776 668 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 KRT7P08729 469 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 ITIH2P19823 946 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 EPHA8P29322 1005 aaPredicted RBP25.46■■□□□ 1.67
FANCA-228ENST00000567943 MAGEA1P43355 309 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 RGRP47804 291 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 RPS21P63220 83 aaKnown RBP25.46■■□□□ 1.67
FANCA-228ENST00000567943 DPYSL3Q14195 570 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 KIAA1161Q6NSJ0 714 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 ABI3BPQ7Z7G0 1075 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 KCTD6Q8NC69 237 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 ADAMTS14Q8WXS8 1223 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 RAB7BQ96AH8 199 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 KLHDC7BQ96G42 594 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 FEM1CQ96JP0 617 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 BMFQ96LC9 184 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 PANX2Q96RD6 677 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 CDC6Q99741 560 aa25.46■■□□□ 1.67
FANCA-228ENST00000567943 IGLON5A6NGN9 336 aa25.45■■□□□ 1.66
FANCA-228ENST00000567943 TRIM16O95361 564 aa25.45■■□□□ 1.66
FANCA-228ENST00000567943 PIGNO95427 931 aa25.45■■□□□ 1.66
FANCA-228ENST00000567943 PAK4O96013 591 aaPredicted RBP25.45■■□□□ 1.66
FANCA-228ENST00000567943 THEGLP0DJG4 465 aa25.45■■□□□ 1.66
FANCA-228ENST00000567943 TIMP2P16035 220 aa25.45■■□□□ 1.66
FANCA-228ENST00000567943 ARHGAP25P42331 645 aa25.45■■□□□ 1.66
FANCA-228ENST00000567943 ZFYVE27Q5T4F4 411 aa25.45■■□□□ 1.66
FANCA-228ENST00000567943 CCDC170Q8IYT3 715 aa25.45■■□□□ 1.66
FANCA-228ENST00000567943 SLC22A18ASQ8N1D0 253 aa25.45■■□□□ 1.66
FANCA-228ENST00000567943 OR13H1Q8NG92 308 aa25.45■■□□□ 1.66
FANCA-228ENST00000567943 KLF6Q99612 283 aaPredicted RBP25.45■■□□□ 1.66
FANCA-228ENST00000567943 C1QTNF2Q9BXJ5 285 aa25.45■■□□□ 1.66
FANCA-228ENST00000567943 CPEB1Q9BZB8 566 aaKnown RBP25.45■■□□□ 1.66
FANCA-228ENST00000567943 SHROOM3Q8TF72 1996 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 FAM221BA6H8Z2 402 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 POM121BA6NF01 834 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 C1QTNF9BB2RNN3 333 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 TSPAN6O43657 245 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 BUB1BO60566 1050 aaPredicted RBP25.44■■□□□ 1.66
FANCA-228ENST00000567943 C1QTNF9P0C862 333 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 AKT2P31751 481 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 SERPINB6P35237 376 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 CYLC1P35663 651 aaPredicted RBP25.44■■□□□ 1.66
FANCA-228ENST00000567943 PDK2Q15119 407 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 TSEN2Q8NCE0 465 aaKnown RBP25.44■■□□□ 1.66
FANCA-228ENST00000567943 GATA6Q92908 595 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 NSMCE3Q96MG7 304 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 CINPQ9BW66 212 aaPredicted RBP25.44■■□□□ 1.66
FANCA-228ENST00000567943 GPR27Q9NS67 375 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 DKK3Q9UBP4 350 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 NEUROG3Q9Y4Z2 214 aa25.44■■□□□ 1.66
FANCA-228ENST00000567943 CACNA1BQ00975 2339 aa25.43■■□□□ 1.66
FANCA-228ENST00000567943 MUSKO15146 869 aa25.43■■□□□ 1.66
FANCA-228ENST00000567943 MAGEC1O60732 1142 aa25.43■■□□□ 1.66
FANCA-228ENST00000567943 LCA5LO95447 670 aa25.43■■□□□ 1.66
FANCA-228ENST00000567943 ARRB1P49407 418 aaPredicted RBP25.43■■□□□ 1.66
FANCA-228ENST00000567943 RFTN1Q14699 578 aaPredicted RBP25.43■■□□□ 1.66
FANCA-228ENST00000567943 TCEAL1Q15170 157 aa25.43■■□□□ 1.66
FANCA-228ENST00000567943 KDM7AQ6ZMT4 941 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms