RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.68□□□□□ -0.86
HERC1-210ENST00000560897 SRPRBQ9Y5M8 271 aaKnown RBP9.68□□□□□ -0.86
HERC1-210ENST00000560897 TNRC6AQ8NDV7 1962 aaKnown RBP9.67□□□□□ -0.86
HERC1-210ENST00000560897 HEATR9A2RTY3 570 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 A6NCN8 305 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 B4E171 279 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 TM7SF2O76062 418 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 ENDOD1O94919 500 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 MT-CO1P00395 513 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 TSPAN7P41732 249 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 GCLMP48507 274 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 PEX5P50542 639 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 OR1D5P58170 312 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 SRP54P61011 504 aaKnown RBP9.67□□□□□ -0.86
HERC1-210ENST00000560897 B4GALNT1Q00973 533 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 ERV3-1Q14264 604 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 HLTFQ14527 1009 aaKnown RBP eCLIP9.67□□□□□ -0.86
HERC1-210ENST00000560897 ALG11Q2TAA5 492 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 ZRANB3Q5FWF4 1079 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 DPY19L3Q6ZPD9 716 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 PARS2Q7L3T8 475 aaKnown RBP9.67□□□□□ -0.86
HERC1-210ENST00000560897 TAC4Q86UU9 113 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 ESX1Q8N693 406 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 CENPTQ96BT3 561 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 ALG14Q96F25 216 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 FAXDC2Q96IV6 333 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 CLIC6Q96NY7 704 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 DPYSL5Q9BPU6 564 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 HEPHQ9BQS7 1158 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 ZPBPQ9BS86 351 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 ZDHHC6Q9H6R6 413 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 SLC39A2Q9NP94 309 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 FBXO2Q9UK22 296 aaPredicted RBP9.67□□□□□ -0.86
HERC1-210ENST00000560897 WASF2Q9Y6W5 498 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 DIDO1Q9BTC0 2240 aaKnown RBP9.67□□□□□ -0.86
HERC1-210ENST00000560897 HIVEP1P15822 2718 aa9.67□□□□□ -0.86
HERC1-210ENST00000560897 CCDC168Q8NDH2 2452 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 NF1P21359 2839 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 CDC14CA4D256 554 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 KCNU1A8MYU2 1149 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 K7ERQ8 282 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 RNF103O00237 685 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 SART1O43290 800 aaKnown RBP9.66□□□□□ -0.86
HERC1-210ENST00000560897 SNAP91O60641 907 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 CLDN11O75508 207 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 SORBS2O94875 1100 aaKnown RBP9.66□□□□□ -0.86
HERC1-210ENST00000560897 CD2BP2O95400 341 aaKnown RBP9.66□□□□□ -0.86
HERC1-210ENST00000560897 PDGFAP04085 211 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 RHOCP08134 193 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 SLC2A3P11169 496 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 KRT13P13646 458 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 VAMP7P51809 220 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 LIMK2P53671 638 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 YWHAEP62258 255 aaKnown RBP9.66□□□□□ -0.86
HERC1-210ENST00000560897 NFATC4Q14934 902 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 NR6A1Q15406 480 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 SPECC1LQ69YQ0 1117 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 UNC13DQ70J99 1090 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 RYBPQ8N488 228 aaPredicted RBP9.66□□□□□ -0.86
HERC1-210ENST00000560897 OR4D9Q8NGE8 314 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 RTP4Q96DX8 246 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 RBM15Q96T37 977 aaKnown RBP eCLIP9.66□□□□□ -0.86
HERC1-210ENST00000560897 SLC25A23Q9BV35 468 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 SLC4A5Q9BY07 1137 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 MIS12Q9H081 205 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 OCIAD1Q9NX40 245 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 RRN3Q9NYV6 651 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 VPS51Q9UID3 782 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 ITM2BQ9Y287 266 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 MRPS18BQ9Y676 258 aaKnown RBP9.66□□□□□ -0.86
HERC1-210ENST00000560897 RPS6KL1Q9Y6S9 549 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 APCP25054 2843 aa9.66□□□□□ -0.86
HERC1-210ENST00000560897 FBN3Q75N90 2809 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 SPG11Q96JI7 2443 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 ARHGEF17Q96PE2 2063 aaPredicted RBP9.65□□□□□ -0.86
HERC1-210ENST00000560897 LRP4O75096 1905 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 C16orf96A6NNT2 1141 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 B4GAT1O43505 415 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 SMAD6O43541 496 aaKnown RBP9.65□□□□□ -0.86
HERC1-210ENST00000560897 STK17BO94768 372 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 NR3C1P04150 777 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 THRAP10827 490 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 VDRP11473 427 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 DLSTP36957 453 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 STAT5AP42229 794 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 ABL2P42684 1182 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 PER3P56645 1201 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 IRF4Q15306 451 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 PRR30Q53SZ7 412 aaPredicted RBP9.65□□□□□ -0.86
HERC1-210ENST00000560897 FBXL22Q6P050 247 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 OGFOD3Q6PK18 319 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 LINGO4Q6UY18 593 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 GDF7Q7Z4P5 450 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 SLC9A9Q8IVB4 645 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 PCDH20Q8N6Y1 951 aaKnown RBP9.65□□□□□ -0.86
HERC1-210ENST00000560897 DCAF4L2Q8NA75 395 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 CLEC4CQ8WTT0 213 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 WDR92Q96MX6 357 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 CTRCQ99895 268 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 MFRPQ9BY79 579 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms