RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMAD3-208ENST00000558827 DNAJC28Q9NX36 388 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 IPO11Q9UI26 975 aaKnown RBP12.67□□□□□ -0.38
SMAD3-208ENST00000558827 ZMIZ1Q9ULJ6 1067 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 TPX2Q9ULW0 747 aaKnown RBP12.67□□□□□ -0.38
SMAD3-208ENST00000558827 MSRB2Q9Y3D2 182 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 NEUROG3Q9Y4Z2 214 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 BZW2Q9Y6E2 419 aaKnown RBP12.67□□□□□ -0.38
SMAD3-208ENST00000558827 PTPRBP23467 1997 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 TRIM38O00635 465 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 SCAMP1O15126 338 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 MUSKO15146 869 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 TSPAN6O43657 245 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 MAGEC1O60732 1142 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 NEBLO76041 1014 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 MAP3K6O95382 1288 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 CYP1A2P05177 515 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 CD48P09326 243 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 NUDT1P36639 197 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 ARL4AP40617 200 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 RXRGP48443 463 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 ADKP55263 362 aaKnown RBP12.66□□□□□ -0.38
SMAD3-208ENST00000558827 DPYSQ14117 519 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 KRT81Q14533 505 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 KIAA1161Q6NSJ0 714 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 POLNQ7Z5Q5 900 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 SRLQ86TD4 932 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 IQCHQ86VS3 1027 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 ZSWIM9Q86XI8 627 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 SLC25A45Q8N413 288 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMAD3-208ENST00000558827 CXorf40AQ8TE69 158 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 KLF6Q99612 283 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-208ENST00000558827 CHP1Q99653 195 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 CINPQ9BW66 212 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-208ENST00000558827 OSBPL1AQ9BXW6 950 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 SUV39H2Q9H5I1 410 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 PCDH18Q9HCL0 1135 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 MBNL1Q9NR56 388 aaKnown RBP12.66□□□□□ -0.38
SMAD3-208ENST00000558827 CTTNBP2NLQ9P2B4 639 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 IP6K2Q9UHH9 426 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 RALYQ9UKM9 306 aaKnown RBP12.66□□□□□ -0.38
SMAD3-208ENST00000558827 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMAD3-208ENST00000558827 SHROOM3Q8TF72 1996 aa12.66□□□□□ -0.38
SMAD3-208ENST00000558827 KMT2BQ9UMN6 2715 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-208ENST00000558827 A6NNZ2 444 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 MYO1FO00160 1098 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 FPGTO14772 594 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 AREL1O15033 823 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 SIGLEC6O43699 453 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 AP1G1O43747 822 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 TPM3P06753 285 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 DGKAP23743 735 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 PCK1P35558 622 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 SCNN1BP51168 640 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 CDH6P55285 790 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 SLC10A7Q0GE19 358 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 PDE1CQ14123 709 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-208ENST00000558827 PIGHQ14442 188 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-208ENST00000558827 INAVAQ3KP66 663 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 BOLA3Q53S33 107 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 CFAP58Q5T655 872 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 AFMIDQ63HM1 303 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 NYAP1Q6ZVC0 841 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 KANSL1Q7Z3B3 1105 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 ABI3BPQ7Z7G0 1075 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 ZNF564Q8TBZ8 553 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-208ENST00000558827 CASKIN2Q8WXE0 1202 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 ZCCHC14Q8WYQ9 949 aaKnown RBP12.65□□□□□ -0.38
SMAD3-208ENST00000558827 LRIG1Q96JA1 1093 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 CSPG4P5Q96PW8 444 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 C1QTNF2Q9BXJ5 285 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 TCEAL2Q9H3H9 227 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-208ENST00000558827 DEF6Q9H4E7 631 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 ERVMER34-1Q9H9K5 563 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 PCDH12Q9NPG4 1184 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 SPTLC3Q9NUV7 552 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 KLF15Q9UIH9 416 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 HS3ST3A1Q9Y663 406 aa12.65□□□□□ -0.38
SMAD3-208ENST00000558827 ANKRD36A6QL64 1941 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 LRRK1Q38SD2 2015 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 CBFA2T2O43439 604 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 TM7SF2O76062 418 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 HTR7P34969 479 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 IGFALSP35858 605 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 TAS2R40P59535 323 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 MAXP61244 160 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 SLC25A11Q02978 314 aaKnown RBP12.64□□□□□ -0.39
SMAD3-208ENST00000558827 OVGP1Q12889 678 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 C1orf61Q13536 156 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 FZD2Q14332 565 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 DPYSL2Q16555 572 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 ZFYVE27Q5T4F4 411 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 SPECC1LQ69YQ0 1117 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 TMCO3Q6UWJ1 677 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 CCNI2Q6ZMN8 369 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-208ENST00000558827 OXR1Q8N573 874 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 OR8K1Q8NGG5 319 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 MDM1Q8TC05 714 aa12.64□□□□□ -0.39
SMAD3-208ENST00000558827 RAB7BQ96AH8 199 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms