RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PIP5KL1Q5T9C9 394 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 KIAA1161Q6NSJ0 714 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 CLEC20AQ6ZU45 233 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 SPRED1Q7Z699 444 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 UNC93AQ86WB7 457 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 XYLT1Q86Y38 959 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 RBFAQ8N0V3 343 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 IQCKQ8N0W5 287 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 GPD1LQ8N335 351 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 CARNMT1Q8N4J0 409 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 ESX1Q8N693 406 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 GOLGA6L1Q8N7Z2 621 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 PCDH19Q8TAB3 1148 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 SEC14L1Q92503 715 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 ERCC4Q92889 916 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-245ENST00000556958 CENPTQ96BT3 561 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 FAM84AQ96KN4 292 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 CCDC114Q96M63 670 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 FIZ1Q96SL8 496 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 PLIN2Q99541 437 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 DPYSL5Q9BPU6 564 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 CLPBQ9H078 707 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 NUCKS1Q9H1E3 243 aaKnown RBP5.86□□□□□ -1.47
ATXN3-245ENST00000556958 FOXP1Q9H334 677 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-245ENST00000556958 NOP53Q9NZM5 478 aaKnown RBP5.86□□□□□ -1.47
ATXN3-245ENST00000556958 TMEM63CQ9P1W3 806 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 LRIT1Q9P2V4 623 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 KCND3Q9UK17 655 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 CROTQ9UKG9 612 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 ZFR2Q9UPR6 939 aaKnown RBP5.86□□□□□ -1.47
ATXN3-245ENST00000556958 STAB1Q9NY15 2570 aa5.86□□□□□ -1.47
ATXN3-245ENST00000556958 MED13LQ71F56 2210 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 AKAP9Q99996 3911 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 FRMD3A2A2Y4 597 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 A6NCN8 305 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 TMEM110-MUSTN1A8MSY1 372 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 KPNA3O00505 521 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-245ENST00000556958 SLC26A4O43511 780 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 NUDT21O43809 227 aaKnown RBP5.85□□□□□ -1.47
ATXN3-245ENST00000556958 PRICKLE3O43900 615 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-245ENST00000556958 ZG16O60844 167 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 PHACTR2O75167 634 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 CLSTN1O94985 981 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 PRNPP04156 253 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 FDPSP14324 419 aaKnown RBP5.85□□□□□ -1.47
ATXN3-245ENST00000556958 VAV1P15498 845 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 HK3P52790 923 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 ITGA1P56199 1179 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 SEMA5AQ13591 1074 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 ARHGAP44Q17R89 818 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 AMZ1Q400G9 498 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 PRR30Q53SZ7 412 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-245ENST00000556958 ZNF667Q5HYK9 610 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 CERCAMQ5T4B2 595 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 L1TD1Q5T7N2 865 aaKnown RBP5.85□□□□□ -1.47
ATXN3-245ENST00000556958 PAPD7Q5XG87 772 aaKnown RBP5.85□□□□□ -1.47
ATXN3-245ENST00000556958 SEL1L3Q68CR1 1132 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 RFWD3Q6PCD5 774 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 OGFOD3Q6PK18 319 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 CEACAM20Q6UY09 585 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 ERN2Q76MJ5 926 aaKnown RBP5.85□□□□□ -1.47
ATXN3-245ENST00000556958 RHOT1Q8IXI2 618 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 ALDH16A1Q8IZ83 802 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 ZNF295-AS1Q8N0V1 137 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 RCBTB1Q8NDN9 531 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 DENND6BQ8NEG7 585 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 TMIEQ8NEW7 156 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 GPR156Q8NFN8 814 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 FRS2Q8WU20 508 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 ASB12Q8WXK4 309 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 AZIN2Q96A70 460 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 PNPLA2Q96AD5 504 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 SNRNP40Q96DI7 357 aaKnown RBP5.85□□□□□ -1.47
ATXN3-245ENST00000556958 CYFIP2Q96F07 1278 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 PPP1R16AQ96I34 528 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 MDFIQ99750 246 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 HDAC8Q9BY41 377 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 EDEM3Q9BZQ6 932 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 UBXN6Q9BZV1 441 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 SPRY4Q9C004 299 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 PHACTR1Q9C0D0 580 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 TWSG1Q9GZX9 223 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 TCEAL2Q9H3H9 227 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-245ENST00000556958 PCIF1Q9H4Z3 704 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 MRPL44Q9H9J2 332 aaKnown RBP5.85□□□□□ -1.47
ATXN3-245ENST00000556958 RDH14Q9HBH5 336 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 MLXIPLQ9NP71 852 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 PDRG1Q9NUG6 133 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 FAM49BQ9NUQ9 324 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 RPS6KL1Q9Y6S9 549 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 CITO14578 2027 aa5.85□□□□□ -1.47
ATXN3-245ENST00000556958 IGHV5-10-1A0A0J9YXX1 117 aa5.84□□□□□ -1.47
ATXN3-245ENST00000556958 A0A1B0GUH1 482 aa5.84□□□□□ -1.47
ATXN3-245ENST00000556958 PIPSLA2A3N6 862 aa5.84□□□□□ -1.47
ATXN3-245ENST00000556958 ZSCAN5CA6NGD5 496 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-245ENST00000556958 EIF3DO15371 548 aaKnown RBP eCLIP5.84□□□□□ -1.47
ATXN3-245ENST00000556958 KRT86O43790 486 aa5.84□□□□□ -1.47
ATXN3-245ENST00000556958 BNIP3LO60238 219 aa5.84□□□□□ -1.47
ATXN3-245ENST00000556958 ACSL4O60488 711 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms