RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 CLIC2O15247 247 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 SART1O43290 800 aaKnown RBP9.59□□□□□ -0.87
YBX3-211ENST00000541351 LEFTY1O75610 366 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 VNN1O95497 513 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 LTFP02788 710 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 CELA2BP08218 269 aaPredicted RBP9.59□□□□□ -0.87
YBX3-211ENST00000541351 THRAP10827 490 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 SLC2A3P11169 496 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 SRCP12931 536 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 KELP23276 732 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 CASP14P31944 242 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 PPM1FP49593 454 aaPredicted RBP9.59□□□□□ -0.87
YBX3-211ENST00000541351 DAOAP59103 153 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 GPLD1P80108 840 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 ART3Q13508 389 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 TSR1Q2NL82 804 aaKnown RBP9.59□□□□□ -0.87
YBX3-211ENST00000541351 ENPP7Q6UWV6 458 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 TAOK1Q7L7X3 1001 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 C12orf56Q8IXR9 622 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 ATP6V0D2Q8N8Y2 350 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 HEPHQ9BQS7 1158 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 NUDT22Q9BRQ3 303 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 AGPAT4Q9NRZ5 378 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 COPG2Q9UBF2 871 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 CROTQ9UKG9 612 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 DGKBQ9Y6T7 804 aa9.59□□□□□ -0.87
YBX3-211ENST00000541351 ZNF106Q9H2Y7 1883 aaKnown RBP9.59□□□□□ -0.87
YBX3-211ENST00000541351 LRRIQ3A6PVS8 624 aaPredicted RBP9.58□□□□□ -0.88
YBX3-211ENST00000541351 POLR1CO15160 346 aaPredicted RBP9.58□□□□□ -0.88
YBX3-211ENST00000541351 PPP6R2O75170 966 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 KATNA1O75449 491 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 CLDN11O75508 207 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 FBXO21O94952 628 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 PDGFAP04085 211 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 CCNYL3P0C7X3 344 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 BPIP17213 487 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 NFKBIAP25963 317 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 IGFALSP35858 605 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 NEK4P51957 841 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 ITGA1P56199 1179 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 MC2RQ01718 297 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 C1QBPQ07021 282 aaKnown RBP9.58□□□□□ -0.88
YBX3-211ENST00000541351 SQSTM1Q13501 440 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 RAPGEF1Q13905 1077 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 NFATC4Q14934 902 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 NR1D2Q14995 579 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 ALG11Q2TAA5 492 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 ZNF394Q53GI3 561 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 VWA2Q5GFL6 755 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 RAP1GAP2Q684P5 730 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 SPECC1LQ69YQ0 1117 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 BHLHA9Q7RTU4 235 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 ZNF438Q7Z4V0 828 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 CDH24Q86UP0 819 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 SLC47A2Q86VL8 602 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 ZNF507Q8TCN5 953 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 CXorf40AQ8TE69 158 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 PMEPA1Q969W9 287 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 TSACCQ96A04 125 aaPredicted RBP9.58□□□□□ -0.88
YBX3-211ENST00000541351 AHCYL2Q96HN2 611 aaKnown RBP9.58□□□□□ -0.88
YBX3-211ENST00000541351 FCRL2Q96LA5 508 aaPredicted RBP9.58□□□□□ -0.88
YBX3-211ENST00000541351 WDR92Q96MX6 357 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 SPRY4Q9C004 299 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 LIMCH1Q9UPQ0 1083 aa9.58□□□□□ -0.88
YBX3-211ENST00000541351 A0A1B0GUH1 482 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 B4GAT1O43505 415 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 KLHL41O60662 606 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 CREG1O75629 220 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 HLA-DRAP01903 254 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 MT-ND3P03897 115 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 CD99P14209 185 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 STAT6P42226 847 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 CASP4P49662 377 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 OR1D5P58170 312 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 AMPD3Q01432 767 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 CDK18Q07002 472 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 LRRC14Q15048 493 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 TCEA2Q15560 299 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 SPOPLQ6IQ16 392 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 C22orf39Q6P5X5 142 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 TMEM71Q6P5X7 295 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 CYB5D1Q6P9G0 228 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 C6orf15Q6UXA7 325 aaPredicted RBP9.57□□□□□ -0.88
YBX3-211ENST00000541351 CENPQQ7L2Z9 268 aaPredicted RBP9.57□□□□□ -0.88
YBX3-211ENST00000541351 PCDH20Q8N6Y1 951 aaKnown RBP9.57□□□□□ -0.88
YBX3-211ENST00000541351 NDRG1Q92597 394 aaKnown RBP9.57□□□□□ -0.88
YBX3-211ENST00000541351 STAMBPL1Q96FJ0 436 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 SLC39A13Q96H72 371 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 RPRD1AQ96P16 312 aaPredicted RBP9.57□□□□□ -0.88
YBX3-211ENST00000541351 FGFBP2Q9BYJ0 223 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 BACH2Q9BYV9 841 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 CEP44Q9C0F1 390 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 MLXIPLQ9NP71 852 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 OCIAD1Q9NX40 245 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 RCOR3Q9P2K3 495 aaPredicted RBP9.57□□□□□ -0.88
YBX3-211ENST00000541351 PCDHGA6Q9Y5G7 932 aa9.57□□□□□ -0.88
YBX3-211ENST00000541351 NIPBLQ6KC79 2804 aaeCLIP9.57□□□□□ -0.88
YBX3-211ENST00000541351 DIDO1Q9BTC0 2240 aaKnown RBP9.56□□□□□ -0.88
YBX3-211ENST00000541351 PRRC2CQ9Y520 2896 aaKnown RBP9.56□□□□□ -0.88
YBX3-211ENST00000541351 KCNU1A8MYU2 1149 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms