RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 A0A1B0GVG6 124 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 MAGEB16A2A368 324 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 SDHDO14521 159 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 ODC1P11926 461 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 MYL4P12829 197 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 CPB1P15086 417 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 ADRA1AP35348 466 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 SOX11P35716 441 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 AIF1P55008 147 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 CDH13P55290 713 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 FOLH1Q04609 750 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 BNC2Q6ZN30 1099 aaPredicted RBP14.19□□□□□ -0.14
UBE3B-210ENST00000539599 ACAD11Q709F0 780 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 SATL1Q86VE3 508 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 ZNF280BQ86YH2 543 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 HMCESQ96FZ2 354 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 FCRL5Q96RD9 977 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 IL12RB2Q99665 862 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 UBAP1Q9NZ09 502 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 CCDC167Q9P0B6 97 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 IPO11Q9UI26 975 aaKnown RBP14.19□□□□□ -0.14
UBE3B-210ENST00000539599 SLC45A1Q9Y2W3 748 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 ANKRD12Q6UB98 2062 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 TCAF2A6NFQ2 919 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 MATN3O15232 486 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 MTSS1O43312 755 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 CSPG5O95196 566 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 CCDC166P0CW27 439 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 UQCRBP14927 111 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 YBX1P67809 324 aaKnown RBP14.19□□□□□ -0.14
UBE3B-210ENST00000539599 SULT2A1Q06520 285 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 PRKAA1Q13131 559 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 MIB1Q86YT6 1006 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 OR6P1Q8NGX9 317 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 DCUN1D1Q96GG9 259 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 PKMYT1Q99640 499 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 PKP2Q99959 881 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 ADAM2Q99965 735 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 ARHGEF38Q9NXL2 777 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 ADA2Q9NZK5 511 aa14.19□□□□□ -0.14
UBE3B-210ENST00000539599 IGLV3-25P01717 112 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 SPATA31D3P0C874 917 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 THRAP10827 490 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 CCNCP24863 283 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 CD151P48509 253 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 MED21Q13503 144 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 PSMD5Q16401 504 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 PIGGQ5H8A4 983 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 GPR158Q5T848 1215 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 NEPROQ6NW34 567 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 SPATA31D4Q6ZUB0 917 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 PQLC1Q8N2U9 271 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 KLHDC9Q8NEP7 349 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 SREK1Q8WXA9 508 aaKnown RBP14.18□□□□□ -0.14
UBE3B-210ENST00000539599 RSPH1Q8WYR4 309 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 VAT1Q99536 393 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 ZNF385DQ9H6B1 395 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 ALG9Q9H6U8 611 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 TRPC7Q9HCX4 862 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 TREX1Q9NSU2 369 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 APPL1Q9UKG1 709 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 PRG3Q9Y2Y8 225 aaPredicted RBP14.18□□□□□ -0.14
UBE3B-210ENST00000539599 AAR2Q9Y312 384 aaKnown RBP14.18□□□□□ -0.14
UBE3B-210ENST00000539599 DTNAQ9Y4J8 743 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 A0A0U1RQS6 177 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 UBFD1O14562 309 aaKnown RBP14.18□□□□□ -0.14
UBE3B-210ENST00000539599 CDKN2DP55273 166 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 ART3Q13508 389 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 PDK3Q15120 406 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 C6orf52Q5T4I8 152 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 SLC30A9Q6PML9 568 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 CYP2R1Q6VVX0 501 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 SPATA24Q86W54 205 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 PSMG2Q969U7 264 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 CNBD2Q96M20 576 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 ZBTB26Q9HCK0 441 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 STK39Q9UEW8 545 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 TRPM7Q96QT4 1865 aa14.18□□□□□ -0.14
UBE3B-210ENST00000539599 A8MT66 165 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 CACNG3O60359 315 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 HOXC8P31273 242 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 CCR1P32246 355 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 SLC12A2P55011 1212 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 ARPP19P56211 112 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 CDKL1Q00532 357 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 EIF4EBP2Q13542 120 aaPredicted RBP14.17□□□□□ -0.14
UBE3B-210ENST00000539599 RASIP1Q5U651 963 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 RANBP10Q6VN20 620 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 LINC00523Q86TU6 105 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 OR52K2Q8NGK3 314 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 OR13J1Q8NGT2 312 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 ATP6V1E2Q96A05 226 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 LRCH3Q96II8 777 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 ACBD6Q9BR61 282 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 MRPL46Q9H2W6 279 aaKnown RBP14.17□□□□□ -0.14
UBE3B-210ENST00000539599 FAM96AQ9H5X1 160 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 PRDM16Q9HAZ2 1276 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 TRMT13Q9NUP7 481 aaKnown RBP14.17□□□□□ -0.14
UBE3B-210ENST00000539599 NOD1Q9Y239 953 aa14.17□□□□□ -0.14
UBE3B-210ENST00000539599 EFEMP1Q12805 493 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms