RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 PROX2Q3B8N5 592 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TPRG1LQ5T0D9 272 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ARHGAP36Q6ZRI8 547 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 VPS36Q86VN1 386 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ZSCAN30Q86W11 494 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 NPWQ8N729 165 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CXorf40AQ8TE69 158 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 LENG8Q96PV6 779 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 WRAP53Q9BUR4 548 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 MRPL47Q9HD33 250 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 GPR27Q9NS67 375 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 DKK3Q9UBP4 350 aa19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 IPO11Q9UI26 975 aaKnown RBP19.29■□□□□ 0.68
TNFRSF1A-212ENST00000539372 FREM2Q5SZK8 3169 aa19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TRABD2BA6NFA1 517 aa19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 JUPP14923 745 aa19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TCF4P15884 667 aa19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 XPAP23025 273 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 IL1R2P27930 398 aa19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ZNF211Q13398 564 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PDE1CQ14123 709 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 SMTNL2Q2TAL5 461 aa19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 HS1BP3Q53T59 392 aa19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 AFMIDQ63HM1 303 aa19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TMPRSS12Q86WS5 348 aa19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 DCP2Q8IU60 420 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ARHGAP12Q8IWW6 846 aa19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CPEB1Q9BZB8 566 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CWC15Q9P013 229 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 BZW2Q9Y6E2 419 aaKnown RBP19.28■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ZZEF1O43149 2961 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ARID1BQ8NFD5 2236 aaPredicted RBP19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 SPTY2D1-AS1A0A0U1RR47 76 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 BUB1BO60566 1050 aaPredicted RBP19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PALMO75781 387 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 RGRP47804 291 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ZBED6P86452 979 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CYP4F3Q08477 520 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CAMK2BQ13554 666 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 DPYSQ14117 519 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 HES3Q5TGS1 186 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PARGQ86W56 976 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 PSTKQ8IV42 348 aaKnown RBP19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 TP53INP2Q8IXH6 220 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 DENND6BQ8NEG7 585 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 OR4C6Q8NH72 309 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ASB12Q8WXK4 309 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 HSPH1Q92598 858 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 SYN2Q92777 582 aaPredicted RBP19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CENPTQ96BT3 561 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 IFT43Q96FT9 208 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 BTBD6Q96KE9 485 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 THAP2Q9H0W7 228 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 SUV39H2Q9H5I1 410 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 ZWILCHQ9H900 591 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 SP110Q9HB58 689 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 IFNKQ9P0W0 207 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 KLF15Q9UIH9 416 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 CAPN11Q9UMQ6 739 aa19.27■□□□□ 0.68
TNFRSF1A-212ENST00000539372 NEBLO76041 1014 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TM7SF2O76062 418 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 SERPING1P05155 500 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 GIMD1P0DJR0 217 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CDK4P11802 303 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 MYF5P13349 255 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ACP1P24666 158 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PCK1P35558 622 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 HNF1BP35680 557 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 IGFALSP35858 605 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PFN3P60673 137 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 DAB2P98082 770 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 SEMG2Q02383 582 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 NFKBIBQ15653 356 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ZSCAN23Q3MJ62 389 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CFAP58Q5T655 872 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CAMK1DQ8IU85 385 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TSEN2Q8NCE0 465 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CINPQ9BW66 212 aaPredicted RBP19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PCDH12Q9NPG4 1184 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 MBNL1Q9NR56 388 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 COQ6Q9Y2Z9 468 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 GOLGA4Q13439 2230 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 DMXL2Q8TDJ6 3036 aa19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TDRD6O60522 2096 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1A-212ENST00000539372 A0A087X0T9 212 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 H3BRJ5 948 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 CSF2P04141 144 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PRKCGP05129 697 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 FAM228BP0C875 321 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 NME1P15531 152 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 AMPD1P23109 780 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 HCAR3P49019 387 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 HNRNPKP61978 463 aaKnown RBP eCLIP19.25■□□□□ 0.677e-7■■■□□ 16.2
TNFRSF1A-212ENST00000539372 ILKQ13418 452 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TMEM52BQ4KMG9 183 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 TXNRD3NBQ6F5E7 133 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 SRLQ86TD4 932 aa19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 PDCD7Q8N8D1 485 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 ZNF548Q8NEK5 533 aaPredicted RBP19.25■□□□□ 0.67
TNFRSF1A-212ENST00000539372 NUP85Q9BW27 656 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms