RNA–Protein interactions for RNA: ENST00000538335.1

LINC01089-207, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 630 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-207ENST00000538335 VPS36Q86VN1 386 aa28.58■■■□□ 2.17
LINC01089-207ENST00000538335 CACTIN-AS1Q8N1I8 211 aa28.58■■■□□ 2.17
LINC01089-207ENST00000538335 KLF6Q99612 283 aaPredicted RBP28.58■■■□□ 2.17
LINC01089-207ENST00000538335 GPATCH2LQ9NWQ4 482 aa28.58■■■□□ 2.17
LINC01089-207ENST00000538335 PCSK1NQ9UHG2 260 aa28.58■■■□□ 2.17
LINC01089-207ENST00000538335 ITM2BQ9Y287 266 aa28.58■■■□□ 2.17
LINC01089-207ENST00000538335 BZW2Q9Y6E2 419 aaKnown RBP28.58■■■□□ 2.17
LINC01089-207ENST00000538335 APC2O95996 2303 aa28.58■■■□□ 2.17
LINC01089-207ENST00000538335 SCAMP1O15126 338 aa28.57■■■□□ 2.16
LINC01089-207ENST00000538335 PRAMEF11O60813 436 aa28.57■■■□□ 2.16
LINC01089-207ENST00000538335 NME1P15531 152 aaKnown RBP28.57■■■□□ 2.16
LINC01089-207ENST00000538335 THOP1P52888 689 aa28.57■■■□□ 2.16
LINC01089-207ENST00000538335 PDE1CQ14123 709 aaPredicted RBP28.57■■■□□ 2.16
LINC01089-207ENST00000538335 NR1I3Q14994 352 aa28.57■■■□□ 2.16
LINC01089-207ENST00000538335 IQCB1Q15051 598 aa28.57■■■□□ 2.16
LINC01089-207ENST00000538335 RFX8Q6ZV50 586 aa28.57■■■□□ 2.16
LINC01089-207ENST00000538335 MARCH9Q86YJ5 346 aa28.57■■■□□ 2.16
LINC01089-207ENST00000538335 BTN2A2Q8WVV5 523 aa28.57■■■□□ 2.16
LINC01089-207ENST00000538335 IQCDQ96DY2 449 aa28.57■■■□□ 2.16
LINC01089-207ENST00000538335 ZNF641Q96N77 438 aaPredicted RBP28.57■■■□□ 2.16
LINC01089-207ENST00000538335 NAP1L5Q96NT1 182 aaPredicted RBP28.57■■■□□ 2.16
LINC01089-207ENST00000538335 SNRNP25Q9BV90 132 aaKnown RBP28.57■■■□□ 2.16
LINC01089-207ENST00000538335 UCKL1Q9NWZ5 548 aa28.57■■■□□ 2.16
LINC01089-207ENST00000538335 NCKIPSDQ9NZQ3 722 aa28.57■■■□□ 2.16
LINC01089-207ENST00000538335 LHX6Q9UPM6 363 aa28.57■■■□□ 2.16
LINC01089-207ENST00000538335 DDX3XO00571 662 aaKnown RBP eCLIP28.56■■■□□ 2.16
LINC01089-207ENST00000538335 MIPP30301 263 aa28.56■■■□□ 2.16
LINC01089-207ENST00000538335 YPEL5P62699 121 aa28.56■■■□□ 2.16
LINC01089-207ENST00000538335 FZD2Q14332 565 aa28.56■■■□□ 2.16
LINC01089-207ENST00000538335 ACAP1Q15027 740 aa28.56■■■□□ 2.16
LINC01089-207ENST00000538335 CYTH1Q15438 398 aa28.56■■■□□ 2.16
LINC01089-207ENST00000538335 TDRD12Q587J7 1177 aaKnown RBP28.56■■■□□ 2.16
LINC01089-207ENST00000538335 RFFLQ8WZ73 363 aa28.56■■■□□ 2.16
LINC01089-207ENST00000538335 TUBGCP5Q96RT8 1024 aa28.56■■■□□ 2.16
LINC01089-207ENST00000538335 ZWILCHQ9H900 591 aa28.56■■■□□ 2.16
LINC01089-207ENST00000538335 LHX3Q9UBR4 397 aa28.56■■■□□ 2.16
LINC01089-207ENST00000538335 GGT7Q9UJ14 662 aa28.56■■■□□ 2.16
LINC01089-207ENST00000538335 CSNK1G3Q9Y6M4 447 aa28.56■■■□□ 2.16
LINC01089-207ENST00000538335 CKMT1AP12532 417 aa28.55■■■□□ 2.16
LINC01089-207ENST00000538335 PFN3P60673 137 aa28.55■■■□□ 2.16
LINC01089-207ENST00000538335 TARDBPQ13148 414 aaKnown RBP eCLIP28.55■■■□□ 2.16
LINC01089-207ENST00000538335 RFTN1Q14699 578 aaPredicted RBP28.55■■■□□ 2.16
LINC01089-207ENST00000538335 PPP6R3Q5H9R7 873 aaPredicted RBP28.55■■■□□ 2.16
LINC01089-207ENST00000538335 ERAP2Q6P179 960 aa28.55■■■□□ 2.16
LINC01089-207ENST00000538335 BRAT1Q6PJG6 821 aa28.55■■■□□ 2.16
LINC01089-207ENST00000538335 LZTR1Q8N653 840 aa28.55■■■□□ 2.16
LINC01089-207ENST00000538335 FAM181AQ8N9Y4 354 aa28.55■■■□□ 2.16
LINC01089-207ENST00000538335 CELF6Q96J87 481 aaKnown RBP28.55■■■□□ 2.16
LINC01089-207ENST00000538335 FUCA2Q9BTY2 467 aa28.55■■■□□ 2.16
LINC01089-207ENST00000538335 SUV39H2Q9H5I1 410 aa28.55■■■□□ 2.16
LINC01089-207ENST00000538335 SP110Q9HB58 689 aa28.55■■■□□ 2.16
LINC01089-207ENST00000538335 PDFQ9HBH1 243 aa28.55■■■□□ 2.16
LINC01089-207ENST00000538335 PALMO75781 387 aa28.54■■■□□ 2.16
LINC01089-207ENST00000538335 TIMP2P16035 220 aa28.54■■■□□ 2.16
LINC01089-207ENST00000538335 PCK1P35558 622 aa28.54■■■□□ 2.16
LINC01089-207ENST00000538335 HCAR3P49019 387 aa28.54■■■□□ 2.16
LINC01089-207ENST00000538335 PAPOLAP51003 745 aaKnown RBP28.54■■■□□ 2.16
LINC01089-207ENST00000538335 ZNF542PQ5EBM4 170 aa28.54■■■□□ 2.16
LINC01089-207ENST00000538335 E4F1Q66K89 784 aaPredicted RBP28.54■■■□□ 2.16
LINC01089-207ENST00000538335 EXOC2Q96KP1 924 aa28.54■■■□□ 2.16
LINC01089-207ENST00000538335 KCTD15Q96SI1 283 aaPredicted RBP28.54■■■□□ 2.16
LINC01089-207ENST00000538335 NRSN2Q9GZP1 204 aa28.54■■■□□ 2.16
LINC01089-207ENST00000538335 CLCA2Q9UQC9 943 aa28.54■■■□□ 2.16
LINC01089-207ENST00000538335 RAXQ9Y2V3 346 aa28.54■■■□□ 2.16
LINC01089-207ENST00000538335 GPSM3Q9Y4H4 160 aa28.54■■■□□ 2.16
LINC01089-207ENST00000538335 A0A1W2PQJ5 194 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 GOLGA6L19H0YKK7 550 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 SPINT1O43278 529 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 MMP20O60882 483 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 JUNDP17535 347 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 ERCC2P18074 760 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 CSNK1DP48730 415 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 CA9Q16790 459 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 KLHL40Q2TBA0 621 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 TMEM52BQ4KMG9 183 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 PAF1Q8N7H5 531 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 ZNF548Q8NEK5 533 aaPredicted RBP28.53■■■□□ 2.16
LINC01089-207ENST00000538335 SYN2Q92777 582 aaPredicted RBP28.53■■■□□ 2.16
LINC01089-207ENST00000538335 VOPP1Q96AW1 172 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 CENPTQ96BT3 561 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 PEBP4Q96S96 227 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 CINPQ9BW66 212 aaPredicted RBP28.53■■■□□ 2.16
LINC01089-207ENST00000538335 SLC39A8Q9C0K1 460 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 ISCUQ9H1K1 167 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 ATP13A3Q9H7F0 1226 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 MYO1AQ9UBC5 1043 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 SPASTQ9UBP0 616 aa28.53■■■□□ 2.16
LINC01089-207ENST00000538335 TSPAN11A1L157 253 aa28.52■■■□□ 2.16
LINC01089-207ENST00000538335 H3BRJ5 948 aa28.52■■■□□ 2.16
LINC01089-207ENST00000538335 J3KR12 359 aa28.52■■■□□ 2.16
LINC01089-207ENST00000538335 K7ESM1 405 aa28.52■■■□□ 2.16
LINC01089-207ENST00000538335 LRCH4O75427 683 aa28.52■■■□□ 2.16
LINC01089-207ENST00000538335 GP1BAP07359 652 aa28.52■■■□□ 2.16
LINC01089-207ENST00000538335 SKILP12757 684 aa28.52■■■□□ 2.16
LINC01089-207ENST00000538335 PTMSP20962 102 aa28.52■■■□□ 2.16
LINC01089-207ENST00000538335 SERPINA4P29622 427 aa28.52■■■□□ 2.16
LINC01089-207ENST00000538335 ARL4AP40617 200 aa28.52■■■□□ 2.16
LINC01089-207ENST00000538335 FANCCQ00597 558 aa28.52■■■□□ 2.16
LINC01089-207ENST00000538335 UGP2Q16851 508 aa28.52■■■□□ 2.16
LINC01089-207ENST00000538335 BOLA3Q53S33 107 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms