RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 IMP4Q96G21 291 aaKnown RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 NAF1Q96HR8 494 aaKnown RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 GPR78Q96P69 363 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 FAM167BQ9BTA0 163 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 OXCT2Q9BYC2 517 aaPredicted RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 ACE2Q9BYF1 805 aaPredicted RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 FBXO44Q9H4M3 255 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 ZNF385DQ9H6B1 395 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 RBM22Q9NW64 420 aaKnown RBP eCLIP9.35□□□□□ -0.91
DDB1-211ENST00000538280 COMMD8Q9NX08 183 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 CLIC5Q9NZA1 410 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 RAP2CQ9Y3L5 183 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 A0A087X1B8 175 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 FAM95CA0A1B0GW59 222 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 LCHNA4D1U4 455 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 DRGXA6NNA5 263 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 H0Y3Z8 333 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 MATN2O00339 956 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 SLC22A2O15244 555 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 CCNT2O60583 730 aaKnown RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 SNUPNO95149 360 aaKnown RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 PAPSS2O95340 614 aaPredicted RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 WISP3O95389 354 aaPredicted RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 HSPA4LO95757 839 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 MMP2P08253 660 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 RPSAP08865 295 aaKnown RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 PAMP19021 973 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 CRABP2P29373 138 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 WNT3AP56704 352 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 TBX4P57082 545 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 RAB10P61026 200 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 MPP1Q00013 466 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 KDSRQ06136 332 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 RCN2Q14257 317 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 USP10Q14694 798 aaKnown RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 RCN1Q15293 331 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 SKIV2LQ15477 1246 aaKnown RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 TAF11Q15544 211 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 TRIP4Q15650 581 aaPredicted RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 SLC14A2Q15849 920 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 TCTN1Q2MV58 587 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 TSNAXIP1Q2TAA8 658 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 MS4A13Q5J8X5 152 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 TSTD2Q5T7W7 516 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 ACBD5Q5T8D3 534 aaPredicted RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 TMCO4Q5TGY1 634 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 LRRC8EQ6NSJ5 796 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 KIAA0408Q6ZU52 694 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 SLC24A5Q71RS6 500 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 SLC41A1Q8IVJ1 513 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 CPSF7Q8N684 471 aaKnown RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 TDRD5Q8NAT2 981 aaKnown RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 MAPK15Q8TD08 544 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 PDCD6IPQ8WUM4 868 aaKnown RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 NRG4Q8WWG1 115 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 ATXN7L3BQ96GX2 97 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 PANX3Q96QZ0 392 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 MYCBPQ99417 103 aaPredicted RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 LRFN3Q9BTN0 628 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 CCDC28BQ9BUN5 200 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 ELAC1Q9H777 363 aaKnown RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 CD320Q9NPF0 282 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 VPS45Q9NRW7 570 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 SLC7A8Q9UHI5 535 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 IPO11Q9UI26 975 aaKnown RBP9.34□□□□□ -0.91
DDB1-211ENST00000538280 SLC39A10Q9ULF5 831 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 PCDHB5Q9Y5E4 795 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 SLC4A7Q9Y6M7 1214 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 NUP205Q92621 2012 aa9.34□□□□□ -0.91
DDB1-211ENST00000538280 MIA3Q5JRA6 1907 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 E2F8A0AVK6 867 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 OR6C75A6NL08 312 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 SLCO1B7G3V0H7 640 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 TK2O00142 265 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 PHGDHO43175 533 aaKnown RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 GRID2O43424 1007 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 ZBTB14O43829 449 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 TBC1D4O60343 1298 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 NPHS1O60500 1241 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 TBX10O75333 385 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 CIB2O75838 187 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 LUC7L3O95232 432 aaKnown RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 MPSTP25325 297 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 ADSLP30566 484 aaPredicted RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 SERPINB5P36952 375 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 ABL2P42684 1182 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 SLC1A2P43004 574 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 CD151P48509 253 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 GPR15P49685 360 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 PSEN1P49768 467 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 CLCN5P51795 746 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 COPAP53621 1224 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 CLNS1AP54105 237 aaKnown RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 DNAJB13P59910 316 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 USP46P62068 366 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 POU4F1Q01851 419 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 ACVR1Q04771 509 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 ILF2Q12905 390 aaKnown RBP9.33□□□□□ -0.92
DDB1-211ENST00000538280 DLG1Q12959 904 aa9.33□□□□□ -0.92
DDB1-211ENST00000538280 KLF10Q13118 480 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms