RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 TPSD1Q9BZJ3 242 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 BTBD1Q9H0C5 482 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RAB17Q9H0T7 212 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RSPH9Q9H1X1 276 aaPredicted RBP5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PABPC3Q9H361 631 aaKnown RBP5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MTG2Q9H4K7 406 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SUV39H2Q9H5I1 410 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 C10orf88Q9H8K7 445 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 LRRC40Q9H9A6 602 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PCDH9Q9HC56 1237 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RAB6BQ9NRW1 208 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 VPS45Q9NRW7 570 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 LHX3Q9UBR4 397 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FAM153AQ9UHL3 310 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CYP8B1Q9UNU6 501 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ATP8A1Q9Y2Q0 1164 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 HCN4Q9Y3Q4 1203 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ARIH1Q9Y4X5 557 aaPredicted RBP5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PCDHB9Q9Y5E1 797 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RAI2Q9Y5P3 530 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ACTL7AQ9Y615 435 aa5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 KIF26AQ9ULI4 1882 aaPredicted RBP5.51□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CDH23Q9H251 3354 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CCDC163A0A0D9SF12 145 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 A0A1W2PP55 124 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 A0A1W2PQF6 199 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TTC24A2A3L6 582 aaPredicted RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SHISA7A6NL88 538 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 C16orf96A6NNT2 1141 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ERI2A8K979 691 aaKnown RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MEI4A8MW99 385 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SLC7A4O43246 635 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 LZTS3O60299 673 aaPredicted RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ZNF500O60304 480 aaPredicted RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RPP40O75818 363 aaKnown RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PAPSS2O95340 614 aaPredicted RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PIGNO95427 931 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CD160O95971 181 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GABRG2P18507 467 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 NDUFV2P19404 249 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 COL9A1P20849 921 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ITGB7P26010 798 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CD6P30203 668 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GKP32189 559 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CNR2P34972 360 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FNTBP49356 437 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 VPS41P49754 854 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TPMTP51580 245 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TERF1P54274 439 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 WNT3AP56704 352 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RPL26P61254 145 aaKnown RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TUBB4BP68371 445 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RPL6Q02878 288 aaKnown RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CDK18Q07002 472 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 WASHC5Q12768 1159 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CNTN1Q12860 1018 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GPS1Q13098 491 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ZBTB17Q13105 803 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CALCOCO2Q13137 446 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MPP3Q13368 585 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FZD5Q13467 585 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TRIP13Q15645 432 aaPredicted RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SLC14A2Q15849 920 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ZNF528Q3MIS6 628 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SYCP2LQ5T4T6 812 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 NAPEPLDQ6IQ20 393 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 C8orf74Q6P047 294 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PKN3Q6P5Z2 889 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 NCEH1Q6PIU2 408 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TSSK4Q6SA08 328 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 TMEM92Q6UXU6 159 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PRR23BQ6ZRT6 265 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 USP30Q70CQ3 517 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 LPCAT2Q7L5N7 544 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PRPF39Q86UA1 669 aaKnown RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 WDR5BQ86VZ2 330 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 CAMK1DQ8IU85 385 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 RGL4Q8IZJ4 473 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ZNF567Q8N184 647 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 ZNF687Q8N1G0 1237 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 PRELID2Q8N945 189 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 C12orf50Q8NA57 414 aaPredicted RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SPATA4Q8NEY3 305 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 LPCAT1Q8NF37 534 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MDGA1Q8NFP4 955 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 IPMKQ8NFU5 416 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SNX19Q92543 992 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FOXJ1Q92949 421 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 SKA1Q96BD8 255 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 IMP4Q96G21 291 aaKnown RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FCRL5Q96RD9 977 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 FAM129BQ96TA1 746 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 HERPUD2Q9BSE4 406 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 LRFN3Q9BTN0 628 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 MLPHQ9BV36 600 aaPredicted RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 HDAC8Q9BY41 377 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GPR63Q9BZJ6 419 aa5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 DDX47Q9H0S4 455 aaKnown RBP5.5□□□□□ -1.53
SCARNA16.4-201ENST00000516956 GBA3Q9H227 469 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms