RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	ICAM1	P05362	532 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	PGK2	P07205	417 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	HOXC6	P09630	235 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	CCL5	P13501	91 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	CD38	P28907	300 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	SNAP25	P60880	206 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	GAB1	Q13480	694 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	KCTD2	Q14681	263 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	WTAP	Q15007	396 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	SEC23B	Q15437	767 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	PDCD2	Q16342	344 aa	Predicted RBP	5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	CCL14	Q16627	93 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	AAK1	Q2M2I8	961 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	BTBD16	Q32M84	506 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	ASPRV1	Q53RT3	343 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	GPATCH4	Q5T3I0	446 aa	Known RBP	5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	SYCE2	Q6PIF2	218 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	RANBP10	Q6VN20	620 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	KYAT3	Q6YP21	454 aa	Known RBP	5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	SLC44A2	Q8IWA5	706 aa	Predicted RBP	5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	RANBP17	Q9H2T7	1088 aa	Known RBP	5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	PABPC3	Q9H361	631 aa	Known RBP	5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	CPVL	Q9H3G5	476 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	ACAD9	Q9H845	621 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	PRDM8	Q9NQV8	689 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	RNF146	Q9NTX7	359 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	FLRT1	Q9NZU1	646 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	CCPG1	Q9ULG6	757 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	NFU1	Q9UMS0	254 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	CNTN6	Q9UQ52	1028 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	LCT	P09848	1927 aa		5.81	□□□□□ -1.48
MATR3-218	ENST00000511978	CENPF	P49454	3210 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	CGB1	A6NKQ9	187 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	KIF28P	B7ZC32	967 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	SH2B2	O14492	632 aa	Predicted RBP	5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	PRY	O14603	147 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	NKX2-8	O15522	239 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	DHX16	O60231	1041 aa	Known RBP	5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	SFPQ	P23246	707 aa	Known RBP eCLIP	5.8	□□□□□ -1.48	2e-6	■■□□□ 12.5
MATR3-218	ENST00000511978	HSPA4	P34932	840 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	FOXF2	Q12947	444 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	KRT32	Q14532	448 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	CNGA3	Q16281	694 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	CDC37	Q16543	378 aa	Predicted RBP	5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	MAP3K21	Q5TCX8	1036 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	ZNF813	Q6ZN06	617 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	MYCT1	Q8N699	235 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	SCAMP5	Q8TAC9	235 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	AKAP1	Q92667	903 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	FAR2	Q96K12	515 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	C5orf34	Q96MH7	638 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	NEK1	Q96PY6	1258 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	ELOVL1	Q9BW60	279 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	5.8	□□□□□ -1.48	2e-11	■■■□□ 18.4
MATR3-218	ENST00000511978	MLXIP	Q9HAP2	919 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	LY9	Q9HBG7	655 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	AGO4	Q9HCK5	861 aa	Known RBP	5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	FBXO40	Q9UH90	709 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	DAPP1	Q9UN19	280 aa		5.8	□□□□□ -1.48
MATR3-218	ENST00000511978	PFAS	O15067	1338 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	WDR19	Q8NEZ3	1342 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	hCG_1642624	A0A1W2PR95	340 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	CCDC69	A6NI79	296 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	PPP6R2	O75170	966 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	CYBA	P13498	195 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	NDUFS1	P28331	727 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	CCND3	P30281	292 aa	Predicted RBP	5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	THBS4	P35443	961 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	AP2B1	P63010	937 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	TROAP	Q12815	778 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	CBFB	Q13951	182 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	ADCK5	Q3MIX3	580 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	USH1G	Q495M9	461 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	CEP78	Q5JTW2	689 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	MFSD14C	Q5VZR4	134 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	DPY19L2P1	Q6NXN4	242 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	JMJD6	Q6NYC1	403 aa	Predicted RBP	5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	KLHL17	Q6TDP4	642 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	LAS2	Q8IYD9	372 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	NKAP	Q8N5F7	415 aa	Known RBP	5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	U2AF1L4	Q8WU68	220 aa	Known RBP	5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	TRMT61A	Q96FX7	289 aa	Known RBP	5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	TCEANC2	Q96MN5	208 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	JAKMIP1	Q96N16	626 aa	Known RBP	5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	DEFB118	Q96PH6	123 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	EFHD1	Q9BUP0	239 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	MECR	Q9BV79	373 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	SORBS1	Q9BX66	1292 aa	Known RBP	5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	LRRC2	Q9BYS8	371 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	UBA5	Q9GZZ9	404 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	MAD2L2	Q9UI95	211 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	PNMA2	Q9UL42	364 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	FRMD4B	Q9Y2L6	1034 aa		5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	SIRT4	Q9Y6E7	314 aa	Predicted RBP	5.79	□□□□□ -1.48
MATR3-218	ENST00000511978	ABCB11	O95342	1321 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	MYH6	P13533	1939 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	ZNFX1	Q9P2E3	1918 aa	Known RBP	5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	BRCA2	P51587	3418 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	5.78	□□□□□ -1.48

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