RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 UBASH3AP57075 661 aa22.34■■□□□ 1.17
PACRGL-220ENST00000508952 CAMK2BQ13554 666 aa22.34■■□□□ 1.17
PACRGL-220ENST00000508952 FZD2Q14332 565 aa22.34■■□□□ 1.17
PACRGL-220ENST00000508952 PROX2Q3B8N5 592 aa22.34■■□□□ 1.17
PACRGL-220ENST00000508952 TPRG1LQ5T0D9 272 aa22.34■■□□□ 1.17
PACRGL-220ENST00000508952 NPWQ8N729 165 aa22.34■■□□□ 1.17
PACRGL-220ENST00000508952 TRIM11Q96F44 468 aa22.34■■□□□ 1.17
PACRGL-220ENST00000508952 LENG8Q96PV6 779 aaPredicted RBP22.34■■□□□ 1.17
PACRGL-220ENST00000508952 EIF3CQ99613 913 aaKnown RBP22.34■■□□□ 1.17
PACRGL-220ENST00000508952 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.34■■□□□ 1.17
PACRGL-220ENST00000508952 WRAP53Q9BUR4 548 aaKnown RBP22.34■■□□□ 1.17
PACRGL-220ENST00000508952 DONSONQ9NYP3 566 aa22.34■■□□□ 1.17
PACRGL-220ENST00000508952 LRRK1Q38SD2 2015 aa22.34■■□□□ 1.17
PACRGL-220ENST00000508952 APC2O95996 2303 aa22.34■■□□□ 1.17
PACRGL-220ENST00000508952 ITPR1Q14643 2758 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 ANKRD36A6QL64 1941 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 MYLKQ15746 1914 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 TRABD2BA6NFA1 517 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 ARHGAP42A6NI28 874 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 MMP20O60882 483 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 TCF4P15884 667 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 RABIFP47224 123 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 ZNF211Q13398 564 aaPredicted RBP22.33■■□□□ 1.17
PACRGL-220ENST00000508952 ARHGAP36Q6ZRI8 547 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 VPS36Q86VN1 386 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 TMPRSS12Q86WS5 348 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 DCP2Q8IU60 420 aaKnown RBP22.33■■□□□ 1.17
PACRGL-220ENST00000508952 ARHGAP12Q8IWW6 846 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 OR4C6Q8NH72 309 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 CPLX3Q8WVH0 158 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 ASB12Q8WXK4 309 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 CPEB1Q9BZB8 566 aaKnown RBP22.33■■□□□ 1.17
PACRGL-220ENST00000508952 MRPL47Q9HD33 250 aaKnown RBP22.33■■□□□ 1.17
PACRGL-220ENST00000508952 DKK3Q9UBP4 350 aa22.33■■□□□ 1.17
PACRGL-220ENST00000508952 ZFYVE26Q68DK2 2539 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 SPTY2D1-AS1A0A0U1RR47 76 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 A0A1W2PQJ5 194 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 DFFAO00273 331 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 GIMD1P0DJR0 217 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 RGRP47804 291 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 PDE1CQ14123 709 aaPredicted RBP22.32■■□□□ 1.16
PACRGL-220ENST00000508952 HES3Q5TGS1 186 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 AFMIDQ63HM1 303 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 DENND6BQ8NEG7 585 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 CXorf40AQ8TE69 158 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 IFT43Q96FT9 208 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 CWC15Q9P013 229 aaKnown RBP22.32■■□□□ 1.16
PACRGL-220ENST00000508952 IPO11Q9UI26 975 aaKnown RBP22.32■■□□□ 1.16
PACRGL-220ENST00000508952 KNTC1P50748 2209 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 ACACAQ13085 2346 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 NBEAQ8NFP9 2946 aa22.32■■□□□ 1.16
PACRGL-220ENST00000508952 FAM208BQ5VWN6 2430 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 CELSR3Q9NYQ7 3312 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 GOLGA6L19H0YKK7 550 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 CDK4P11802 303 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 JUPP14923 745 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 IL1R2P27930 398 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 IGFALSP35858 605 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 CYP4F3Q08477 520 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 DPYSQ14117 519 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 SMTNL2Q2TAL5 461 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 HS1BP3Q53T59 392 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 PARGQ86W56 976 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 PSTKQ8IV42 348 aaKnown RBP22.31■■□□□ 1.16
PACRGL-220ENST00000508952 TP53INP2Q8IXH6 220 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 TSEN2Q8NCE0 465 aaKnown RBP22.31■■□□□ 1.16
PACRGL-220ENST00000508952 SYN2Q92777 582 aaPredicted RBP22.31■■□□□ 1.16
PACRGL-220ENST00000508952 CENPTQ96BT3 561 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 SUV39H2Q9H5I1 410 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 ZWILCHQ9H900 591 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 SP110Q9HB58 689 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 KLF15Q9UIH9 416 aa22.31■■□□□ 1.16
PACRGL-220ENST00000508952 BZW2Q9Y6E2 419 aaKnown RBP22.31■■□□□ 1.16
PACRGL-220ENST00000508952 BUB1BO60566 1050 aaPredicted RBP22.3■■□□□ 1.16
PACRGL-220ENST00000508952 PALMO75781 387 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 NEBLO76041 1014 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 TM7SF2O76062 418 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 NME1P15531 152 aaKnown RBP22.3■■□□□ 1.16
PACRGL-220ENST00000508952 XPAP23025 273 aaPredicted RBP22.3■■□□□ 1.16
PACRGL-220ENST00000508952 ACP1P24666 158 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 PCK1P35558 622 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 HNF1BP35680 557 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 PFN3P60673 137 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 HNRNPKP61978 463 aaKnown RBP eCLIP22.3■■□□□ 1.16
PACRGL-220ENST00000508952 ZBED6P86452 979 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 DAB2P98082 770 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 CAMK1DQ8IU85 385 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 PDCD7Q8N8D1 485 aaKnown RBP22.3■■□□□ 1.16
PACRGL-220ENST00000508952 ZNF548Q8NEK5 533 aaPredicted RBP22.3■■□□□ 1.16
PACRGL-220ENST00000508952 BTBD6Q96KE9 485 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 THAP2Q9H0W7 228 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 MBNL1Q9NR56 388 aaKnown RBP22.3■■□□□ 1.16
PACRGL-220ENST00000508952 IFNKQ9P0W0 207 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 CAPN11Q9UMQ6 739 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 COQ6Q9Y2Z9 468 aa22.3■■□□□ 1.16
PACRGL-220ENST00000508952 TSPAN11A1L157 253 aa22.29■■□□□ 1.16
PACRGL-220ENST00000508952 CSF2P04141 144 aa22.29■■□□□ 1.16
PACRGL-220ENST00000508952 SERPING1P05155 500 aa22.29■■□□□ 1.16
PACRGL-220ENST00000508952 MYF5P13349 255 aa22.29■■□□□ 1.16
PACRGL-220ENST00000508952 HCAR3P49019 387 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms