RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 ENOSF1Q7L5Y1 443 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 ERMP1Q7Z2K6 904 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 ZDHHC13Q8IUH4 622 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 P3H2Q8IVL5 708 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 PHTF2Q8N3S3 785 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 FANK1Q8TC84 345 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 GRIN3AQ8TCU5 1115 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 ELMO1Q92556 727 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 FBXL20Q96IG2 436 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 ZNF512BQ96KM6 892 aaPredicted RBP8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 NPAS2Q99743 824 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 DSN1Q9H410 356 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 ZNF395Q9H8N7 513 aaPredicted RBP8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 LIN7BQ9HAP6 207 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 NECTIN3Q9NQS3 549 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 IPO11Q9UI26 975 aaKnown RBP8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 NUDT5Q9UKK9 219 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 PCDHGB4Q9UN71 923 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 ABCG2Q9UNQ0 655 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 PCDHGB5Q9Y5G0 923 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 V9GYQ6 96 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 A0A1B0GTW7 788 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 C7orf72A4D263 438 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 SNAP23O00161 211 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 EI24O14681 340 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 IFNA7P01567 189 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 GLULP15104 373 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 NPR3P17342 541 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 TGM1P22735 817 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 DBPQ10586 325 aaPredicted RBP8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 NFIAQ12857 509 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 FASTKQ14296 549 aaKnown RBP8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 NFIL3Q16649 462 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 POTEGQ6S5H5 508 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 C19orf18Q8NEA5 215 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 FBXL13Q8NEE6 735 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 DEDD2Q8WXF8 326 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 HEXIM2Q96MH2 286 aaKnown RBP8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 SPOCK3Q9BQ16 436 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 REEP2Q9BRK0 252 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 KCTD10Q9H3F6 313 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 NARFLQ9H6Q4 476 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 SPATA2Q9UM82 520 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 CLUHO75153 1309 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 FAM208AQ9UK61 1670 aaKnown RBP8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 FAM149AA5PLN7 773 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 NMT2O60551 498 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 MED24O75448 989 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 ITGAVP06756 1048 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 FGFR1P11362 822 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 CYP11B1P15538 503 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 ZNF26P17031 533 aaPredicted RBP8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 VBP1P61758 197 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 CYP4F2P78329 520 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 CHRNB3Q05901 458 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 ZNF33BQ06732 778 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 CYP4F3Q08477 520 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 GRM1Q13255 1194 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 HIST2H2ACQ16777 129 aaPredicted RBP8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 PPP1R3AQ16821 1122 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 TPRG1LQ5T0D9 272 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 FAXCQ5TGI0 409 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 SPOCD1Q6ZMY3 1216 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 OR13F1Q8NGS4 319 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 SPATA18Q8TC71 538 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 CPA5Q8WXQ8 436 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 TESCQ96BS2 214 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 TWNKQ96RR1 684 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 GTPBP2Q9BX10 602 aaKnown RBP8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 SLC52A2Q9HAB3 445 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 BOLA1Q9Y3E2 137 aa8.25□□□□□ -1.09
CRNKL1-205ENST00000496549 CCDC78A2IDD5 438 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 EFCAB10A6NFE3 127 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 EIF3DO15371 548 aaKnown RBP eCLIP8.24□□□□□ -1.091e-7■□□□□ 8.6
CRNKL1-205ENST00000496549 BBOX1O75936 387 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 GDI2P50395 445 aaKnown RBP8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 RPL14P50914 215 aaKnown RBP8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 IFITM2Q01629 132 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 KCNC4Q03721 635 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 TMEM119Q4V9L6 283 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 ANKFN1Q8N957 763 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 C7orf57Q8NEG2 295 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 NCLNQ969V3 563 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 VPS39Q96JC1 886 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 RIPOR3Q96MK2 946 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 ZNF285Q96NJ3 590 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 LRRC40Q9H9A6 602 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 EXOSC4Q9NPD3 245 aaKnown RBP8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 FAM49BQ9NUQ9 324 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 EDARQ9UNE0 448 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 H7C2Y5 167 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 TADA2AO75478 443 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 CLIC3O95833 236 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 TNNI3P19429 210 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 KELP23276 732 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 PSMA2P25787 234 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 ACTR2P61160 394 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 SCN1BQ07699 218 aa8.24□□□□□ -1.09
CRNKL1-205ENST00000496549 TARDBPQ13148 414 aaKnown RBP eCLIP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms