RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ARHGAP42A6NI28 874 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 A6NNZ2 444 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 TAF4O00268 1085 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 TRIM38O00635 465 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 AREL1O15033 823 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 FFAR2O15552 330 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 AP1G1O43747 822 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 MYBL1P10243 752 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 GJC1P36383 396 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 NUDT1P36639 197 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 NDST2P52849 883 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 MMRN1Q13201 1228 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 DPYSQ14117 519 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 FZD2Q14332 565 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 ATP13A4Q4VNC1 1196 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 INO80DQ53TQ3 878 aaPredicted RBP10.74□□□□□ -0.69
NELFE-213ENST00000494956 CCDC122Q5T0U0 273 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 FAM182AQ5T1J6 154 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 AFMIDQ63HM1 303 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 KIAA1161Q6NSJ0 714 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 ALKBH5Q6P6C2 394 aaKnown RBP10.74□□□□□ -0.69
NELFE-213ENST00000494956 CCNI2Q6ZMN8 369 aaPredicted RBP10.74□□□□□ -0.69
NELFE-213ENST00000494956 VPS36Q86VN1 386 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 CAMK1DQ8IU85 385 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 TSEN2Q8NCE0 465 aaKnown RBP10.74□□□□□ -0.69
NELFE-213ENST00000494956 MDM1Q8TC05 714 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 LRRN4Q8WUT4 740 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 ZCCHC14Q8WYQ9 949 aaKnown RBP10.74□□□□□ -0.69
NELFE-213ENST00000494956 SYN2Q92777 582 aaPredicted RBP10.74□□□□□ -0.69
NELFE-213ENST00000494956 TRIM11Q96F44 468 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 NCAPGQ9BPX3 1015 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 C1QTNF2Q9BXJ5 285 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 MRPL47Q9HD33 250 aaKnown RBP10.74□□□□□ -0.69
NELFE-213ENST00000494956 MBNL1Q9NR56 388 aaKnown RBP10.74□□□□□ -0.69
NELFE-213ENST00000494956 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.74□□□□□ -0.69
NELFE-213ENST00000494956 KLHL11Q9NVR0 708 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 KLF15Q9UIH9 416 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 ANAPC7Q9UJX3 599 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 PNMA8BQ9ULN7 279 aaPredicted RBP10.74□□□□□ -0.69
NELFE-213ENST00000494956 NENFQ9UMX5 172 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 CEP295Q9C0D2 2601 aa10.74□□□□□ -0.69
NELFE-213ENST00000494956 FAM221BA6H8Z2 402 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 SCAMP1O15126 338 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 TSPAN6O43657 245 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 SIGLEC6O43699 453 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 PALMO75781 387 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 PIAS2O75928 621 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 NEBLO76041 1014 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 MAP3K6O95382 1288 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 CYP1A2P05177 515 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 CD48P09326 243 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 GIMD1P0DJR0 217 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 DGKAP23743 735 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 IGFALSP35858 605 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 SSR1P43307 286 aaKnown RBP10.73□□□□□ -0.69
NELFE-213ENST00000494956 ACADVLP49748 655 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 SLC25A11Q02978 314 aaKnown RBP10.73□□□□□ -0.69
NELFE-213ENST00000494956 RAD51Q06609 339 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 SLC10A7Q0GE19 358 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 OVGP1Q12889 678 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 SGCGQ13326 291 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 PDE1CQ14123 709 aaPredicted RBP10.73□□□□□ -0.69
NELFE-213ENST00000494956 TCEA2Q15560 299 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 INAVAQ3KP66 663 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 TMPRSS7Q7RTY8 843 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 POLNQ7Z5Q5 900 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 RBFAQ8N0V3 343 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 KDF1Q8NAX2 398 aaPredicted RBP10.73□□□□□ -0.69
NELFE-213ENST00000494956 CASKIN2Q8WXE0 1202 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 LRIG1Q96JA1 1093 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 CSPG4P5Q96PW8 444 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 OSBPL1AQ9BXW6 950 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 TCEAL2Q9H3H9 227 aaPredicted RBP10.73□□□□□ -0.69
NELFE-213ENST00000494956 SP110Q9HB58 689 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 PCDH18Q9HCL0 1135 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 DNAJC28Q9NX36 388 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 BZW2Q9Y6E2 419 aaKnown RBP10.73□□□□□ -0.69
NELFE-213ENST00000494956 IGF2RP11717 2491 aa10.73□□□□□ -0.69
NELFE-213ENST00000494956 A8MX80 341 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 H3BRJ5 948 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 YKT6O15498 198 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 MAGEC1O60732 1142 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 CAPNS1P04632 268 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 HTR7P34969 479 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 PCK1P35558 622 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 ADKP55263 362 aaKnown RBP10.72□□□□□ -0.69
NELFE-213ENST00000494956 TAS2R40P59535 323 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 EIF2B5Q13144 721 aaKnown RBP10.72□□□□□ -0.69
NELFE-213ENST00000494956 PIGHQ14442 188 aaPredicted RBP10.72□□□□□ -0.69
NELFE-213ENST00000494956 PTPRRQ15256 657 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 DPYSL2Q16555 572 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 PROX2Q3B8N5 592 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 KYAT3Q6YP21 454 aaKnown RBP10.72□□□□□ -0.69
NELFE-213ENST00000494956 SRLQ86TD4 932 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 PGBD5Q8N414 524 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 OXR1Q8N573 874 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 TP53I13Q8NBR0 393 aaPredicted RBP10.72□□□□□ -0.69
NELFE-213ENST00000494956 ZNF564Q8TBZ8 553 aaPredicted RBP10.72□□□□□ -0.69
NELFE-213ENST00000494956 CXorf40AQ8TE69 158 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 TSC1Q92574 1164 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms