RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 STC2O76061 302 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 CXCL10P02778 98 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 HDCP19113 662 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 SP100P23497 879 aaPredicted RBP10.49□□□□□ -0.73
SAMM50-206ENST00000494795 MPSTP25325 297 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 CORO1AP31146 461 aaKnown RBP10.49□□□□□ -0.73
SAMM50-206ENST00000494795 CA8P35219 290 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 SERPINB8P50452 374 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 LBRQ14739 615 aaKnown RBP10.49□□□□□ -0.73
SAMM50-206ENST00000494795 SNX30Q5VWJ9 437 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 TXNDC8Q6A555 127 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 LRRC43Q8N309 656 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 ZNF784Q8NCA9 323 aaPredicted RBP10.49□□□□□ -0.73
SAMM50-206ENST00000494795 RILPQ96NA2 401 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 GPR78Q96P69 363 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 GATA5Q9BWX5 397 aaPredicted RBP10.49□□□□□ -0.73
SAMM50-206ENST00000494795 SMG9Q9H0W8 520 aaKnown RBP10.49□□□□□ -0.73
SAMM50-206ENST00000494795 NMRAL1Q9HBL8 299 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 TAS2R1Q9NYW7 299 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 MTRRQ9UBK8 725 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 DCDC2Q9UHG0 476 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 H0Y3Z8 333 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 TSPAN8P19075 237 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 GEMP55040 296 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 USP41Q3LFD5 358 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 SLC9B1Q4ZJI4 515 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 OTOP2Q7RTS6 562 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 CRLF3Q8IUI8 442 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 GBP7Q8N8V2 638 aaPredicted RBP10.49□□□□□ -0.73
SAMM50-206ENST00000494795 ISL2Q96A47 359 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 ELMO2Q96JJ3 720 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 DNAJC1Q96KC8 554 aaKnown RBP10.49□□□□□ -0.73
SAMM50-206ENST00000494795 SPATA17Q96L03 361 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 TRIM62Q9BVG3 475 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 LRMDAQ9H2I8 198 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 WDR55Q9H6Y2 383 aaPredicted RBP10.49□□□□□ -0.73
SAMM50-206ENST00000494795 TLE6Q9H808 572 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 PDFQ9HBH1 243 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 THAP1Q9NVV9 213 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 CLEC4EQ9ULY5 219 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 SPO11Q9Y5K1 396 aa10.49□□□□□ -0.73
SAMM50-206ENST00000494795 GOLGA8CPA6NN73 597 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 LDB2O43679 373 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 RTN3O95197 1032 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 TGDSO95455 350 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 CNTFP26441 200 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 SLC8A1P32418 973 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 ATP5C1P36542 298 aaKnown RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 CDKN2DP55273 166 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 NRG1Q02297 640 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 TWF1Q12792 350 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 SNCBQ16143 134 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 ATG16L1Q676U5 607 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 PDPK2PQ6A1A2 396 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 LINC00523Q86TU6 105 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 RNF168Q8IYW5 571 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 PHTF2Q8N3S3 785 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 PPHLN1Q8NEY8 458 aaKnown RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 OR6P1Q8NGX9 317 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 OR6K2Q8NGY2 324 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 WDR60Q8WVS4 1066 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 MARK4Q96L34 752 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 UBE2OQ9C0C9 1292 aaKnown RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 DENND2DQ9H6A0 471 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 CYP4F12Q9HCS2 524 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 TRPC7Q9HCX4 862 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 ATP13A1Q9HD20 1204 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 XPR1Q9UBH6 696 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 FBXO5Q9UKT4 447 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 AGO1Q9UL18 857 aaKnown RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 PCDHGC4Q9Y5F7 938 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 TRIM43BA6NCK2 446 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 CAPN14A8MX76 684 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 K7ERQ8 282 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 CBX4O00257 560 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 NEMP1O14524 444 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 ACSL4O60488 711 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 PRAMEF12O95522 483 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 CD160O95971 181 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 MT-CO1P00395 513 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 MZF1P28698 734 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 SERPINH1P50454 418 aaKnown RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 SCNN1BP51168 640 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 RENBPP51606 427 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 ZNF135P52742 658 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 NDST2P52849 883 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 NAGLUP54802 743 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 CSHL1Q14406 222 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 LRRC26Q2I0M4 334 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 TIGD7Q6NT04 549 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 NEPROQ6NW34 567 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 OR6Y1Q8NGX8 325 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 PIWIL2Q8TC59 973 aaKnown RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 ACMSDQ8TDX5 336 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 HEXDCQ8WVB3 486 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 TRIM43Q96BQ3 446 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 SCYL1Q96KG9 808 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 OR52B2Q96RD2 323 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 ACE2Q9BYF1 805 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 RHOJQ9H4E5 214 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms