RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 DNTTP04053 509 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 ACADMP11310 421 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 ETS1P14921 441 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 ITGB7P26010 798 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 PSMB4P28070 264 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 SLC8A1P32418 973 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 ADCY8P40145 1251 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 NUBP1P53384 320 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 COPAP53621 1224 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 NRLP54845 237 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 RPS14P62263 151 aaKnown RBP11.67□□□□□ -0.54
LSM2-214ENST00000493387 CDK16Q00536 496 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 GPS1Q13098 491 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 CST6Q15828 149 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 ARMC12Q5T9G4 340 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 PCGF5Q86SE9 256 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 PRPF39Q86UA1 669 aaKnown RBP11.67□□□□□ -0.54
LSM2-214ENST00000493387 JAMLQ86YT9 394 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 KLHDC8BQ8IXV7 354 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 DTWD2Q8NBA8 298 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 BBOF1Q8ND07 529 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 OR6K2Q8NGY2 324 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 GRIN3AQ8TCU5 1115 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 SPOCK2Q92563 424 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 RBM15Q96T37 977 aaKnown RBP eCLIP11.67□□□□□ -0.54
LSM2-214ENST00000493387 C1QTNF1Q9BXJ1 281 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 ADGRE3Q9BY15 652 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 RAB17Q9H0T7 212 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 PABPC3Q9H361 631 aaKnown RBP11.67□□□□□ -0.54
LSM2-214ENST00000493387 EIF2B3Q9NR50 452 aaKnown RBP11.67□□□□□ -0.54
LSM2-214ENST00000493387 RAB6BQ9NRW1 208 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 BCCIPQ9P287 314 aaKnown RBP eCLIP11.67□□□□□ -0.54
LSM2-214ENST00000493387 ASIC3Q9UHC3 531 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 NCKAP1Q9Y2A7 1128 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 RAI2Q9Y5P3 530 aa11.67□□□□□ -0.54
LSM2-214ENST00000493387 CCDC163A0A0D9SF12 145 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 TSPAN11A1L157 253 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 SMAPO00193 183 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 AP3B1O00203 1094 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 KPNA3O00505 521 aaPredicted RBP11.66□□□□□ -0.54
LSM2-214ENST00000493387 TRAFD1O14545 582 aaPredicted RBP11.66□□□□□ -0.54
LSM2-214ENST00000493387 TTI1O43156 1089 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 SLC7A4O43246 635 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 GPR37L1O60883 481 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 ZNF217O75362 1048 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 PMPCBO75439 489 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 PGLSO95336 258 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 METTL18O95568 372 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 UGT2B4P06133 528 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 CTSLP07711 333 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 MMP2P08253 660 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 ZSCAN5DPP0CG00 497 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 GABRG2P18507 467 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 XPAP23025 273 aaPredicted RBP11.66□□□□□ -0.54
LSM2-214ENST00000493387 AVPR2P30518 371 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 PSMD8P48556 350 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 LMAN1P49257 510 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 WNT3AP56704 352 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 SARNPP82979 210 aaKnown RBP11.66□□□□□ -0.54
LSM2-214ENST00000493387 CDK18Q07002 472 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 SEMA5AQ13591 1074 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 TRIP13Q15645 432 aaPredicted RBP11.66□□□□□ -0.54
LSM2-214ENST00000493387 NAPEPLDQ6IQ20 393 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 C8orf74Q6P047 294 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 KDELC1Q6UW63 502 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 KIAA1324Q6UXG2 1013 aaKnown RBP11.66□□□□□ -0.54
LSM2-214ENST00000493387 USP30Q70CQ3 517 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 LINC00523Q86TU6 105 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 KBTBD6Q86V97 674 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 CAMK1DQ8IU85 385 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 PGBD3Q8N328 593 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.66□□□□□ -0.54
LSM2-214ENST00000493387 GLIS1Q8NBF1 620 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 SPATA22Q8NHS9 363 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 HMGB4Q8WW32 186 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 RAB7BQ96AH8 199 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 ECHDC3Q96DC8 303 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 IFT43Q96FT9 208 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 OXNAD1Q96HP4 312 aaPredicted RBP11.66□□□□□ -0.54
LSM2-214ENST00000493387 FEM1CQ96JP0 617 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 MRGPRX1Q96LB2 322 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 KLHL32Q96NJ5 620 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 SRPK1Q96SB4 655 aaKnown RBP11.66□□□□□ -0.54
LSM2-214ENST00000493387 FSD1LQ9BXM9 530 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 HDAC8Q9BY41 377 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 MKRN2Q9H000 416 aaKnown RBP11.66□□□□□ -0.54
LSM2-214ENST00000493387 LRRC40Q9H9A6 602 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 ETNK1Q9HBU6 452 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 EBF1Q9UH73 591 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 PHTF1Q9UMS5 762 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 UTP11Q9Y3A2 253 aaKnown RBP11.66□□□□□ -0.54
LSM2-214ENST00000493387 PCDHGC4Q9Y5F7 938 aa11.66□□□□□ -0.54
LSM2-214ENST00000493387 LOC285095A0A1B0GVY8 99 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 TTC24A2A3L6 582 aaPredicted RBP11.65□□□□□ -0.54
LSM2-214ENST00000493387 C16orf96A6NNT2 1141 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 PRR33A8MZF0 331 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 MID1O15344 667 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 RAD51CO43502 376 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 PIGNO95427 931 aa11.65□□□□□ -0.54
LSM2-214ENST00000493387 AP2A1O95782 977 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms