RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 ZNF542PQ5EBM4 170 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 FIGNQ5HY92 759 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 HGSNATQ68CP4 663 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 GDPD4Q6W3E5 623 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PARGQ86W56 976 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ZSWIM9Q86XI8 627 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ZNF354CQ86Y25 554 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 RFFLQ8WZ73 363 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ZNF653Q96CK0 615 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 IFT43Q96FT9 208 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CELF6Q96J87 481 aaKnown RBP11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 LENG8Q96PV6 779 aaPredicted RBP11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 DHX35Q9H5Z1 703 aaKnown RBP11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 DKK3Q9UBP4 350 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 KLF15Q9UIH9 416 aa11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ARHGEF17Q96PE2 2063 aaPredicted RBP11.36□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PTPRQQ9UMZ3 2332 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SYCE3A1L190 88 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 TRABD2BA6NFA1 517 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 EIF3CLB5ME19 914 aaKnown RBP11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PRAMEF11O60813 436 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 POP4O95707 220 aaKnown RBP11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 FTLP02792 175 aaPredicted RBP11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 C1SP09871 688 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SKILP12757 684 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 MIPP30301 263 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 MMP12P39900 470 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 RABIFP47224 123 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 NDST2P52849 883 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 INSM1Q01101 510 aaPredicted RBP11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ZNF211Q13398 564 aaPredicted RBP11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ILKQ13418 452 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 NR1I3Q14994 352 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CYTH1Q15438 398 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 KLHL40Q2TBA0 621 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 RFX8Q6ZV50 586 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 LUZP1Q86V48 1076 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 TMPRSS12Q86WS5 348 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 TP53INP2Q8IXH6 220 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 TP53I13Q8NBR0 393 aaPredicted RBP11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 FAM174AQ8TBP5 190 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ASB12Q8WXK4 309 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CENPTQ96BT3 561 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ARHGEF26Q96DR7 871 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 FEM1CQ96JP0 617 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 EIF3CQ99613 913 aaKnown RBP11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SLC39A8Q9C0K1 460 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CBX8Q9HC52 389 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 DNAJC28Q9NX36 388 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 NLGN3Q9NZ94 848 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 UBA2Q9UBT2 640 aaPredicted RBP11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CNOT8Q9UFF9 292 aaKnown RBP11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PCSK1NQ9UHG2 260 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 RAXQ9Y2V3 346 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 HS3ST3A1Q9Y663 406 aa11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 URB1O60287 2271 aaKnown RBP11.35□□□□□ -0.59
RAB11FIP3-210ENST00000487899 EEF2KO00418 725 aaKnown RBP11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 FPGTO14772 594 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 MUSKO15146 869 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 NEBLO76041 1014 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CSF2P04141 144 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 IL1R2P27930 398 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 HNF1BP35680 557 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CYP4F3Q08477 520 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 KLHL30Q0D2K2 578 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 EIF2B5Q13144 721 aaKnown RBP11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PDE1CQ14123 709 aaPredicted RBP11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 IRF4Q15306 451 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 FILIP1LQ4L180 1135 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ERMARDQ5T6L9 678 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ARHGAP36Q6ZRI8 547 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 VPS36Q86VN1 386 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 RBFAQ8N0V3 343 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 PDCD7Q8N8D1 485 aaKnown RBP11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 TSEN2Q8NCE0 465 aaKnown RBP11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 NXPE2Q96DL1 559 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 NSMCE3Q96MG7 304 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 WRAP53Q9BUR4 548 aaKnown RBP11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 CPEB1Q9BZB8 566 aaKnown RBP11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 EDEM3Q9BZQ6 932 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 ISCUQ9H1K1 167 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 SCINQ9Y6U3 715 aa11.34□□□□□ -0.59
RAB11FIP3-210ENST00000487899 A0A1W2PQJ5 194 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 K7ESM1 405 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 NEMP1O14524 444 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SCAMP1O15126 338 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PRPSAP2O60256 369 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 BUB1BO60566 1050 aaPredicted RBP11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 MMP20O60882 483 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SERPINC1P01008 464 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 GYPCP04921 128 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 MYBL1P10243 752 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CDK4P11802 303 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CKMT1AP12532 417 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 MYF5P13349 255 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TIMP2P16035 220 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 DESP17661 470 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ERCC2P18074 760 aa11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PAPOLAP51003 745 aaKnown RBP11.33□□□□□ -0.6
RAB11FIP3-210ENST00000487899 FANCCQ00597 558 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms