RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 HES6Q96HZ4 224 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 LRFN5Q96NI6 719 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 IL17FQ96PD4 163 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 ISCA1Q9BUE6 129 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 CTDSP1Q9GZU7 261 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 IL25Q9H293 177 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 TTC12Q9H892 705 aaPredicted RBP4.31□□□□□ -1.72
SMC4-215ENST00000484799 DONSONQ9NYP3 566 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 OR6C3Q9NZP0 311 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 KIF17Q9P2E2 1029 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 GTF2A1LQ9UNN4 478 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 SLC45A1Q9Y2W3 748 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 CKAP5Q14008 2032 aa4.31□□□□□ -1.72
SMC4-215ENST00000484799 FAM90A20PA6NIJ5 464 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 ERVV-2B6SEH9 535 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 NBNO60934 754 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 HSD3B1P14060 373 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 FMO4P31512 558 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 IL15P40933 162 aaPredicted RBP4.3□□□□□ -1.72
SMC4-215ENST00000484799 MTNR1AP48039 350 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 ARSFP54793 590 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 BNC1Q01954 994 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 FAM27E3Q08E93 113 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 ITGADQ13349 1161 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 BIRC3Q13489 604 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 ARHGEF6Q15052 776 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 ADCK5Q3MIX3 580 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 TUBB8Q3ZCM7 444 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 TBC1D9BQ66K14 1250 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 IL20RBQ6UXL0 311 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 GDPD4Q6W3E5 623 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 DENND6AQ8IWF6 608 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 CCDC105Q8IYK2 499 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 PGBD5Q8N414 524 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 PAF1Q8N7H5 531 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 SDCCAG3Q96C92 435 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 FEM1CQ96JP0 617 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 NODALQ96S42 347 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 YME1L1Q96TA2 773 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 G6PC2Q9NQR9 355 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 SPATS2LQ9NUQ6 558 aaKnown RBP4.3□□□□□ -1.72
SMC4-215ENST00000484799 ZNF69Q9UC07 566 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 DERAQ9Y315 318 aa4.3□□□□□ -1.72
SMC4-215ENST00000484799 RRP7AQ9Y3A4 280 aaKnown RBP4.3□□□□□ -1.72
SMC4-215ENST00000484799 PIP5K1CO60331 668 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 LMX1BO60663 402 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 ATP2C2O75185 946 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 TIPRLO75663 272 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 WDHD1O75717 1129 aaPredicted RBP4.29□□□□□ -1.72
SMC4-215ENST00000484799 CSF1P09603 554 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 WEE2P0C1S8 567 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 PTPN9P43378 593 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 DLX5P56178 289 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 FOXO1Q12778 655 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 DLG1Q12959 904 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 CUL4BQ13620 913 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 PRKG1Q13976 671 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 ZRSR1Q15695 479 aaKnown RBP4.29□□□□□ -1.72
SMC4-215ENST00000484799 ME3Q16798 604 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 CTXN3Q4LDR2 81 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 ALFQ53S48 1182 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 ZNF484Q5JVG2 852 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 CBWD5Q5RIA9 395 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 TANGO2Q6ICL3 276 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 TMPRSS12Q86WS5 348 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 KCNH5Q8NCM2 988 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 SETD9Q8NE22 299 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 MCPH1Q8NEM0 835 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 LINS1Q8NG48 757 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 OR4N2Q8NGD1 307 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 STT3BQ8TCJ2 826 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 GPT2Q8TD30 523 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 SECTM1Q8WVN6 248 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 ZNF385AQ96PM9 386 aaKnown RBP4.29□□□□□ -1.72
SMC4-215ENST00000484799 MSTO1Q9BUK6 570 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 CLK4Q9HAZ1 481 aaKnown RBP4.29□□□□□ -1.72
SMC4-215ENST00000484799 DGKBQ9Y6T7 804 aa4.29□□□□□ -1.72
SMC4-215ENST00000484799 HNRNPCL2B2RXH8 293 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 GAGE7O76087 117 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 ATP1A1P05023 1023 aaKnown RBP4.28□□□□□ -1.72
SMC4-215ENST00000484799 GAGE12FP0CL80 117 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 GAGE12GP0CL81 117 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 GAGE12IP0CL82 117 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 ZNF8P17098 575 aaPredicted RBP4.28□□□□□ -1.72
SMC4-215ENST00000484799 CTPS1P17812 591 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 CD53P19397 219 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 RXRAP19793 462 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 TCEA1P23193 301 aaKnown RBP4.28□□□□□ -1.72
SMC4-215ENST00000484799 HNF1BP35680 557 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 CHKAP35790 457 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 PRKAA2P54646 552 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 HILS1P60008 231 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 GAGE1Q13065 139 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 GAGE4Q13068 117 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 SH2D4BQ5SQS7 431 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 LIN54Q6MZP7 749 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 CCDC70Q6NSX1 233 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 MON1AQ86VX9 555 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 CACNA2D3Q8IZS8 1091 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 GDPD5Q8WTR4 605 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms