RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 A6NNC1 897 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 HSPB2A8KAH6 182 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 HSPB6O14558 160 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 BCAT2O15382 392 aaPredicted RBP6.24□□□□□ -1.41
VPS50-212ENST00000476413 PRPF4O43172 522 aaKnown RBP eCLIP6.24□□□□□ -1.41
VPS50-212ENST00000476413 TMCC2O75069 709 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 PGM3O95394 542 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 TFP02787 698 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 ACSL1P33121 698 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 PSMB10P40306 273 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 ARHGAP25P42331 645 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 GABRB2P47870 512 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 GNAQP50148 359 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 HSPB2Q16082 182 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 HIST2H2ACQ16777 129 aaPredicted RBP6.24□□□□□ -1.41
VPS50-212ENST00000476413 SUPT20HL1Q3ZLR7 823 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 LRRC8EQ6NSJ5 796 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 TMEM71Q6P5X7 295 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 TDRPQ86YL5 185 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 TMC8Q8IU68 726 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 ARHGAP12Q8IWW6 846 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.24□□□□□ -1.41
VPS50-212ENST00000476413 DPP10Q8N608 796 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 MCPH1Q8NEM0 835 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 SNRNP27Q8WVK2 155 aaKnown RBP6.24□□□□□ -1.41
VPS50-212ENST00000476413 GTF3C6Q969F1 213 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 MMABQ96EY8 250 aaPredicted RBP6.24□□□□□ -1.41
VPS50-212ENST00000476413 TUBB6Q9BUF5 446 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 TKTL2Q9H0I9 626 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 MVB12BQ9H7P6 319 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 SLC6A13Q9NSD5 602 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 PLK2Q9NYY3 685 aa6.24□□□□□ -1.41
VPS50-212ENST00000476413 A0A0U1RQF3 1178 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 A0A1W2PPC1 479 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 FAM90A8PA6NJQ4 464 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 LRRC53A6NM62 1247 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 A8MZ25 164 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 KLRF2D3W0D1 207 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 E5RJQ4 531 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 KLK8O60259 260 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 TLR2O60603 784 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 ATG13O75143 517 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 CLDN7O95471 211 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 HSP90AA1P07900 732 aaKnown RBP6.23□□□□□ -1.41
VPS50-212ENST00000476413 FAM90A13PP0C7W8 464 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 FAM90A24PP0C7X0 464 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 CERS1P27544 350 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 EPHB2P29323 1055 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 CDAP32320 146 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 PTGER1P34995 402 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 CSTF3Q12996 717 aaKnown RBP6.23□□□□□ -1.41
VPS50-212ENST00000476413 FRG1Q14331 258 aaKnown RBP6.23□□□□□ -1.41
VPS50-212ENST00000476413 IRF3Q14653 427 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 VEPH1Q14D04 833 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 DPCR1Q3MIW9 517 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 HMBOX1Q6NT76 420 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 KLHL35Q6PF15 583 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 ZNF793Q6ZN11 406 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 NOXA1Q86UR1 476 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 FAM185AQ8N0U4 392 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 SNAPC3Q92966 411 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 YME1L1Q96TA2 773 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 KRTAP4-5Q9BYR2 181 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 FTOQ9C0B1 505 aaKnown RBP eCLIP6.23□□□□□ -1.41
VPS50-212ENST00000476413 ASAH2Q9NR71 780 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 SPATS2LQ9NUQ6 558 aaKnown RBP6.23□□□□□ -1.41
VPS50-212ENST00000476413 MSRB1Q9NZV6 116 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 HAO1Q9UJM8 370 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 ZNF215Q9UL58 517 aaPredicted RBP6.23□□□□□ -1.41
VPS50-212ENST00000476413 CARD8Q9Y2G2 431 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 RAP2CQ9Y3L5 183 aa6.23□□□□□ -1.41
VPS50-212ENST00000476413 A0A096LPK6 155 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 A0A1W2PRG0 241 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 CGB1A6NKQ9 187 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 ZNF814B7Z6K7 855 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 USP17L23D6RBM5 183 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 MASP2O00187 686 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 AKAP8O43823 692 aaKnown RBP6.22□□□□□ -1.41
VPS50-212ENST00000476413 KIF1CO43896 1103 aaKnown RBP6.22□□□□□ -1.41
VPS50-212ENST00000476413 HOXB5P09067 269 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 CSH1P0DML2 217 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 CSH2P0DML3 217 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 IRF1P10914 325 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 ITGAXP20702 1163 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 PPARGP37231 505 aaPredicted RBP6.22□□□□□ -1.41
VPS50-212ENST00000476413 GPR12P47775 334 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 NUCB1Q02818 461 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 ZNF91Q05481 1191 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 WTAPQ15007 396 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 PPP2R5BQ15173 497 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 COL28A1Q2UY09 1125 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 CXorf66Q5JRM2 361 aaPredicted RBP6.22□□□□□ -1.41
VPS50-212ENST00000476413 C6orf10Q5SRN2 563 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 TSSK4Q6SA08 328 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 OR8H2Q8N162 312 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 DDB2Q92466 427 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 SMARCE1Q969G3 411 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 BBS4Q96RK4 519 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 SEMA4CQ9C0C4 833 aa6.22□□□□□ -1.41
VPS50-212ENST00000476413 B3GNT4Q9C0J1 378 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms