RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 FEM1CQ96JP0 617 aa20.59■□□□□ 0.89
CDHR3-210ENST00000474330 RPP25Q9BUL9 199 aaKnown RBP20.59■□□□□ 0.89
CDHR3-210ENST00000474330 TMEM109Q9BVC6 243 aa20.59■□□□□ 0.89
CDHR3-210ENST00000474330 IL22Q9GZX6 179 aa20.59■□□□□ 0.89
CDHR3-210ENST00000474330 SYBUQ9NX95 663 aa20.59■□□□□ 0.89
CDHR3-210ENST00000474330 FAM53CQ9NYF3 392 aa20.59■□□□□ 0.89
CDHR3-210ENST00000474330 KIAA1549LQ6ZVL6 1849 aa20.58■□□□□ 0.89
CDHR3-210ENST00000474330 TMEM221A6NGB7 291 aa20.58■□□□□ 0.89
CDHR3-210ENST00000474330 M0R296 226 aa20.58■□□□□ 0.89
CDHR3-210ENST00000474330 POLR2EP19388 210 aaKnown RBP20.58■□□□□ 0.89
CDHR3-210ENST00000474330 GDI1P31150 447 aa20.58■□□□□ 0.89
CDHR3-210ENST00000474330 CSNK1DP48730 415 aa20.58■□□□□ 0.89
CDHR3-210ENST00000474330 STAT4Q14765 748 aa20.58■□□□□ 0.89
CDHR3-210ENST00000474330 CEP85LQ5SZL2 805 aa20.58■□□□□ 0.89
CDHR3-210ENST00000474330 NCEH1Q6PIU2 408 aa20.58■□□□□ 0.89
CDHR3-210ENST00000474330 SH2D3CQ8N5H7 860 aa20.58■□□□□ 0.89
CDHR3-210ENST00000474330 ISG20Q96AZ6 181 aaKnown RBP20.58■□□□□ 0.89
CDHR3-210ENST00000474330 RPL10LQ96L21 214 aaKnown RBP20.58■□□□□ 0.89
CDHR3-210ENST00000474330 NSMCE3Q96MG7 304 aa20.58■□□□□ 0.89
CDHR3-210ENST00000474330 SH3GL2Q99962 352 aa20.58■□□□□ 0.89
CDHR3-210ENST00000474330 RAPGEFL1Q9UHV5 662 aa20.58■□□□□ 0.89
CDHR3-210ENST00000474330 MAGEB16A2A368 324 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 OPA1O60313 960 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 ZNF821O75541 412 aaPredicted RBP20.57■□□□□ 0.88
CDHR3-210ENST00000474330 STK19P49842 368 aaPredicted RBP20.57■□□□□ 0.88
CDHR3-210ENST00000474330 CRADDP78560 199 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 CDK18Q07002 472 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 TDGQ13569 410 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 SLC1A5Q15758 541 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 CERCAMQ5T4B2 595 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 CASC4Q6P4E1 433 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 CAPN12Q6ZSI9 719 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 KDELC2Q7Z4H8 507 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 UBALD2Q8IYN6 164 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 SLC44A3Q8N4M1 653 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 NXPE3Q969Y0 559 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 PKNOX2Q96KN3 472 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 ROPN1BQ9BZX4 212 aaPredicted RBP20.57■□□□□ 0.88
CDHR3-210ENST00000474330 CEP44Q9C0F1 390 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 ROPN1Q9HAT0 212 aaPredicted RBP20.57■□□□□ 0.88
CDHR3-210ENST00000474330 PLAC1Q9HBJ0 212 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 DEC1Q9P2X7 70 aa20.57■□□□□ 0.88
CDHR3-210ENST00000474330 ARIH1Q9Y4X5 557 aaPredicted RBP20.57■□□□□ 0.88
CDHR3-210ENST00000474330 TCEA3O75764 348 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 SYF2O95926 243 aaKnown RBP20.56■□□□□ 0.88
CDHR3-210ENST00000474330 TPH1P17752 444 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 PGAM1P18669 254 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 COL9A1P20849 921 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 SLC6A11P48066 632 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 VASPP50552 380 aaPredicted RBP20.56■□□□□ 0.88
CDHR3-210ENST00000474330 DGKKQ5KSL6 1271 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 ARMC3Q5W041 872 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 UNC5AQ6ZN44 842 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 BMP8AQ7Z5Y6 402 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 CROCCP2Q86T23 111 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 SRLQ86TD4 932 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 ZBTB9Q96C00 473 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 IFT43Q96FT9 208 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 CCDC77Q9BR77 488 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 GTSE1Q9NYZ3 720 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 SAMD15Q9P1V8 674 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 ERVW-1Q9UQF0 538 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 ARNTLO00327 626 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 ATP9BO43861 1147 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 ASLP04424 464 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 ATXN1LP0C7T5 689 aaKnown RBP20.56■□□□□ 0.88
CDHR3-210ENST00000474330 HLA-DPA1P20036 260 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 GJA4P35212 333 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 CHRNA4P43681 627 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 AP1S1P61966 158 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 STEAP4Q687X5 459 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 GRAMD4Q6IC98 578 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 FBF1Q8TES7 1133 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 CFAP36Q96G28 342 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 TRIB3Q96RU7 358 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 TDRD1Q9BXT4 1180 aaKnown RBP20.56■□□□□ 0.88
CDHR3-210ENST00000474330 TM6SF2Q9BZW4 377 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 BRD9Q9H8M2 597 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 MED4Q9NPJ6 270 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 RABGEF1Q9UJ41 708 aa20.56■□□□□ 0.88
CDHR3-210ENST00000474330 NARSO43776 548 aaKnown RBP20.55■□□□□ 0.88
CDHR3-210ENST00000474330 ATP5BP06576 529 aaKnown RBP20.55■□□□□ 0.88
CDHR3-210ENST00000474330 EIF2DP41214 584 aaKnown RBP20.55■□□□□ 0.88
CDHR3-210ENST00000474330 MAPK8P45983 427 aa20.55■□□□□ 0.88
CDHR3-210ENST00000474330 SNRPD1P62314 119 aaKnown RBP20.55■□□□□ 0.88
CDHR3-210ENST00000474330 PCID2Q5JVF3 399 aa20.55■□□□□ 0.88
CDHR3-210ENST00000474330 SIRPB2Q5JXA9 342 aa20.55■□□□□ 0.88
CDHR3-210ENST00000474330 ATXN7L2Q5T6C5 722 aaPredicted RBP20.55■□□□□ 0.88
CDHR3-210ENST00000474330 C22orf39Q6P5X5 142 aa20.55■□□□□ 0.88
CDHR3-210ENST00000474330 CYS1Q717R9 158 aa20.55■□□□□ 0.88
CDHR3-210ENST00000474330 TMEM135Q86UB9 458 aa20.55■□□□□ 0.88
CDHR3-210ENST00000474330 SLC25A41Q8N5S1 370 aa20.55■□□□□ 0.88
CDHR3-210ENST00000474330 PCDH20Q8N6Y1 951 aaKnown RBP20.55■□□□□ 0.88
CDHR3-210ENST00000474330 OR2AP1Q8NGE2 309 aa20.55■□□□□ 0.88
CDHR3-210ENST00000474330 GSDMBQ8TAX9 411 aa20.55■□□□□ 0.88
CDHR3-210ENST00000474330 ACSS3Q9H6R3 686 aa20.55■□□□□ 0.88
CDHR3-210ENST00000474330 SLCO3A1Q9UIG8 710 aa20.55■□□□□ 0.88
CDHR3-210ENST00000474330 SOX13Q9UN79 622 aa20.55■□□□□ 0.88
CDHR3-210ENST00000474330 ZNF318Q5VUA4 2279 aa20.54■□□□□ 0.88
CDHR3-210ENST00000474330 FAM237BA0A1B0GVD1 139 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms