RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 IARS2Q9NSE4 1012 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 XPR1Q9UBH6 696 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 NEMP2A6NFY4 417 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 NR5A2O00482 541 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 SDHDO14521 159 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 SLC22A2O15244 555 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 H2AFYO75367 372 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 GCATO75600 419 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 DLGAP3O95886 979 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 EDN1P05305 212 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 ALOX5P09917 674 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 HSPA1AP0DMV8 641 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 HSPA1BP0DMV9 641 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 MTHFD1P11586 935 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 IL7RP16871 459 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 PROZP22891 400 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 CDH5P33151 784 aaPredicted RBP9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 RPS9P46781 194 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 SEPHS1P49903 392 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 PLA2G16P53816 162 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 TGFB2P61812 414 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 COPZ1P61923 177 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 TRAP1Q12931 704 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 SEMA5AQ13591 1074 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 LRP8Q14114 963 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 MAPRE2Q15555 327 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 AGAP7PQ5VUJ5 663 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 STEAP4Q687X5 459 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 HHIPL2Q6UWX4 724 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 FAM183BPQ6ZVS7 135 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 USP33Q8TEY7 942 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 PTCD2Q8WV60 388 aaKnown RBP9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 HTR3CQ8WXA8 447 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 RMDN3Q96TC7 470 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 ZNF385DQ9H6B1 395 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 VRTNQ9H8Y1 702 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 TRPV5Q9NQA5 729 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 CHRAC1Q9NRG0 131 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 WDR70Q9NW82 654 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 GDAP2Q9NXN4 497 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 DKK3Q9UBP4 350 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 TIMM22Q9Y584 194 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 UBIAD1Q9Y5Z9 338 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 TLL2Q9Y6L7 1015 aa9.62□□□□□ -0.87
NHLRC3-203ENST00000470258 NRXN2Q9P2S2 1712 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 M0R3G1 203 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 NRP2O60462 931 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 BCAS1O75363 584 aaPredicted RBP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 TSPAN8P19075 237 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 ADSLP30566 484 aaPredicted RBP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 SDC4P31431 198 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 SFNP31947 248 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 HLCSP50747 726 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 PLK1P53350 603 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 FPGSQ05932 587 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 POU5F1BQ06416 359 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 TRIM32Q13049 653 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 AQP6Q13520 282 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 EMC2Q15006 297 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 CCDC14Q49A88 953 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 CCNYL2Q5T2Q4 361 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 ZNF773Q6PK81 442 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 USP43Q70EL4 1123 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 RNF135Q8IUD6 432 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 ANKRD13AQ8IZ07 590 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 MFSD3Q96ES6 412 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 VPS39Q96JC1 886 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 ZNF341Q9BYN7 854 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 WDR12Q9GZL7 423 aaKnown RBP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 MIR1-1HGQ9H1L0 117 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 ATP13A3Q9H7F0 1226 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 RAVER2Q9HCJ3 691 aaKnown RBP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 TBC1D13Q9NVG8 400 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 ANKMY1Q9P2S6 941 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 MID2Q9UJV3 735 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 IFT52Q9Y366 437 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 RBBP6Q7Z6E9 1792 aaKnown RBP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 SYNJ2BP-COX16A0A087WUM0 186 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 PTGES3LE9PB15 166 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 SLCO1B7G3V0H7 640 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 RNF103O00237 685 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 TAF4O00268 1085 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 TNPO2O14787 897 aaKnown RBP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 DEAF1O75398 565 aaPredicted RBP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 DDHD2O94830 711 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 NADKO95544 446 aaPredicted RBP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 MPOP05164 745 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 MBL2P11226 248 aaPredicted RBP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 NCK1P16333 377 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 ASPAP45381 313 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 MCCD1P59942 119 aaPredicted RBP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 NSUN2Q08J23 767 aaKnown RBP eCLIP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 PPIL2Q13356 520 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 BOLA3Q53S33 107 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 ARHGEF16Q5VV41 709 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 UBE2UQ5VVX9 321 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 ZYG11AQ6WRX3 759 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 ADCK1Q86TW2 530 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms