RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 INSIG1O15503 277 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 SLC7A4O43246 635 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 SNX3O60493 162 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 GREM1O60565 184 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 EDF1O60869 148 aaKnown RBP9.43□□□□□ -0.9
SMC1A-205ENST00000469129 TMCC1O94876 653 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 CRTAMO95727 393 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 IL1BP01584 269 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 APOA4P06727 396 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 ATXN1LP0C7T5 689 aaKnown RBP9.43□□□□□ -0.9
SMC1A-205ENST00000469129 TROVE2P10155 538 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMC1A-205ENST00000469129 HOXB8P17481 243 aaPredicted RBP9.43□□□□□ -0.9
SMC1A-205ENST00000469129 DNAJB1P25685 340 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 TYK2P29597 1187 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 ETV4P43268 484 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 MAGEA12P43365 314 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 CHRNA4P43681 627 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 SERPINB4P48594 390 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 SGSHP51688 502 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 KPNA2P52292 529 aaKnown RBP9.43□□□□□ -0.9
SMC1A-205ENST00000469129 AP1S1P61966 158 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 PRAMEP78395 509 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 QPCTQ16769 361 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 CCDC153Q494R4 210 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 SIRPB2Q5JXA9 342 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 ATG16L1Q676U5 607 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 CCDC91Q7Z6B0 441 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 SHKBP1Q8TBC3 707 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 DDI1Q8WTU0 396 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 SPOCK2Q92563 424 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 PTPRN2Q92932 1015 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 WBP2Q969T9 261 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 ACDQ96AP0 544 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 VPS39Q96JC1 886 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 CYP2S1Q96SQ9 504 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 GPR22Q99680 433 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 C17orf80Q9BSJ5 609 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 ADGRE3Q9BY15 652 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 PITPNM3Q9BZ71 974 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 TASP1Q9H6P5 420 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 SNX15Q9NRS6 342 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 SLC17A7Q9P2U7 560 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 SLC17A6Q9P2U8 582 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 PHTF1Q9UMS5 762 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 PLLPQ9Y342 182 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 USP15Q9Y4E8 981 aaPredicted RBP9.43□□□□□ -0.9
SMC1A-205ENST00000469129 PSAT1Q9Y617 370 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 DOCK6Q96HP0 2047 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 HMX2A2RU54 273 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 ZNF197O14709 1029 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 CLASP2O75122 1294 aaKnown RBP9.42□□□□□ -0.9
SMC1A-205ENST00000469129 VAPBO95292 243 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 ALDOAP04075 364 aaKnown RBP9.42□□□□□ -0.9
SMC1A-205ENST00000469129 TCF3P15923 654 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 CR2P20023 1033 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 FOXN2P32314 431 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 CSKP41240 450 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 CD151P48509 253 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 CLCN5P51795 746 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 RHOAP61586 193 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 ARF5P84085 180 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 USP4Q13107 963 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 RNF43Q68DV7 783 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 ZNF470Q6ECI4 717 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 FOXR1Q6PIV2 292 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 CCDC121Q6ZUS5 278 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 BBS7Q8IWZ6 715 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 CMTM8Q8IZV2 173 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 DCLK2Q8N568 766 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 OTUD6BQ8N6M0 293 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 CCDC63Q8NA47 563 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 C2CD4AQ8NCU7 369 aaPredicted RBP9.42□□□□□ -0.9
SMC1A-205ENST00000469129 OR52K2Q8NGK3 314 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 ZNF398Q8TD17 642 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 SLC22A17Q8WUG5 538 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 SCG3Q8WXD2 468 aaKnown RBP9.42□□□□□ -0.9
SMC1A-205ENST00000469129 ZNF75CPQ92670 426 aaPredicted RBP9.42□□□□□ -0.9
SMC1A-205ENST00000469129 OTUB2Q96DC9 234 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 TSPAN17Q96FV3 270 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 ELAC2Q9BQ52 826 aaKnown RBP9.42□□□□□ -0.9
SMC1A-205ENST00000469129 TDRD1Q9BXT4 1180 aaKnown RBP9.42□□□□□ -0.9
SMC1A-205ENST00000469129 SLC13A1Q9BZW2 595 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 LMAN2LQ9H0V9 348 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 MFSD1Q9H3U5 465 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 MANSC1Q9H8J5 431 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMC1A-205ENST00000469129 HACD3Q9P035 362 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 KIAA1522Q9P206 1035 aaPredicted RBP9.42□□□□□ -0.9
SMC1A-205ENST00000469129 KLHL14Q9P2G3 628 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 TBC1D14Q9P2M4 693 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 VPS51Q9UID3 782 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 CORO1CQ9ULV4 474 aaPredicted RBP9.42□□□□□ -0.9
SMC1A-205ENST00000469129 ARL2BPQ9Y2Y0 163 aa9.42□□□□□ -0.9
SMC1A-205ENST00000469129 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.41□□□□□ -0.9
SMC1A-205ENST00000469129 MROH6A6NGR9 719 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 SOX1O00570 391 aaPredicted RBP9.41□□□□□ -0.9
SMC1A-205ENST00000469129 SLC9A3R1O14745 358 aaPredicted RBP9.41□□□□□ -0.9
SMC1A-205ENST00000469129 MUSKO15146 869 aa9.41□□□□□ -0.9
SMC1A-205ENST00000469129 RPP40O75818 363 aaKnown RBP9.41□□□□□ -0.9
SMC1A-205ENST00000469129 ZMPSTE24O75844 475 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms